Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 IGHV3-47-201ENST00000425060 335 ntBASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 AC020765.3-201ENST00000613051 740 ntBASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RFWD2Q8NHY2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.04■□□□□ 0.16
RFWD2Q8NHY2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms