Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 ACKR1-201ENST00000368121 1240 ntBASIC19.31■□□□□ 0.68
SLX4Q8IY92 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 HSPB1P2-201ENST00000448722 546 ntBASIC19.3■□□□□ 0.68
SLX4Q8IY92 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 HINT2P1-201ENST00000419438 481 ntBASIC19.3■□□□□ 0.68
SLX4Q8IY92 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.3■□□□□ 0.68
SLX4Q8IY92 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLX4Q8IY92 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 UPF3AP2-201ENST00000457924 1132 ntBASIC19.29■□□□□ 0.68
SLX4Q8IY92 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 AC023310.1-201ENST00000554836 735 ntBASIC19.29■□□□□ 0.68
SLX4Q8IY92 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 KRT8P19-201ENST00000551916 1455 ntBASIC19.29■□□□□ 0.68
SLX4Q8IY92 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.29■□□□□ 0.68
SLX4Q8IY92 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLX4Q8IY92 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLX4Q8IY92 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.28■□□□□ 0.68
SLX4Q8IY92 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLX4Q8IY92 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLX4Q8IY92 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLX4Q8IY92 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLX4Q8IY92 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.28■□□□□ 0.68
SLX4Q8IY92 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SLX4Q8IY92 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms