Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.19■□□□□ 0.66
SLF2Q8IX21 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.19■□□□□ 0.66
SLF2Q8IX21 INE1-201ENST00000456273 945 ntBASIC19.19■□□□□ 0.66
SLF2Q8IX21 GIMAP3P-201ENST00000495150 836 ntBASIC19.19■□□□□ 0.66
SLF2Q8IX21 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.19■□□□□ 0.66
SLF2Q8IX21 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.19■□□□□ 0.66
SLF2Q8IX21 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.19■□□□□ 0.66
SLF2Q8IX21 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SLF2Q8IX21 TMEM261P1-201ENST00000604899 340 ntBASIC19.19■□□□□ 0.66
SLF2Q8IX21 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLF2Q8IX21 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLF2Q8IX21 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 AC009053.2-201ENST00000563701 2365 ntBASIC19.19■□□□□ 0.66
SLF2Q8IX21 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLF2Q8IX21 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF2Q8IX21 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 WASH4P-201ENST00000564273 1246 ntBASIC19.18■□□□□ 0.66
SLF2Q8IX21 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF2Q8IX21 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLF2Q8IX21 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 FLJ38576-201ENST00000623820 2459 ntBASIC19.17■□□□□ 0.66
SLF2Q8IX21 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLF2Q8IX21 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.17■□□□□ 0.66
SLF2Q8IX21 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.16■□□□□ 0.66
SLF2Q8IX21 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF2Q8IX21 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.16■□□□□ 0.66
SLF2Q8IX21 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF2Q8IX21 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.16■□□□□ 0.66
SLF2Q8IX21 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLF2Q8IX21 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF2Q8IX21 AC022211.2-201ENST00000585075 2527 ntBASIC19.16■□□□□ 0.66
SLF2Q8IX21 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF2Q8IX21 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLF2Q8IX21 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLF2Q8IX21 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLF2Q8IX21 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF2Q8IX21 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF2Q8IX21 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms