Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
APLFQ8IW19 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
APLFQ8IW19 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 AC023908.3-201ENST00000564211 3047 ntBASIC16.14■□□□□ 0.17
APLFQ8IW19 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
APLFQ8IW19 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.14■□□□□ 0.17
APLFQ8IW19 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
APLFQ8IW19 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
APLFQ8IW19 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 RHOQP3-201ENST00000437982 621 ntBASIC16.14■□□□□ 0.17
APLFQ8IW19 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.14■□□□□ 0.17
APLFQ8IW19 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 IGHV3-52-201ENST00000519770 353 ntBASIC16.14■□□□□ 0.17
APLFQ8IW19 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.14■□□□□ 0.17
APLFQ8IW19 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.14■□□□□ 0.17
APLFQ8IW19 MIR3197-201ENST00000582241 73 ntBASIC16.14■□□□□ 0.17
APLFQ8IW19 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
APLFQ8IW19 AC004877.2-201ENST00000623941 599 ntBASIC16.14■□□□□ 0.17
APLFQ8IW19 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
APLFQ8IW19 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
APLFQ8IW19 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.14■□□□□ 0.17
APLFQ8IW19 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
APLFQ8IW19 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
APLFQ8IW19 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
APLFQ8IW19 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.14■□□□□ 0.17
APLFQ8IW19 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APLFQ8IW19 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.14■□□□□ 0.17
APLFQ8IW19 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
APLFQ8IW19 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.13■□□□□ 0.17
APLFQ8IW19 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.13■□□□□ 0.17
APLFQ8IW19 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
APLFQ8IW19 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.13■□□□□ 0.17
APLFQ8IW19 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
APLFQ8IW19 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
APLFQ8IW19 AC079328.2-201ENST00000561241 3354 ntBASIC16.13■□□□□ 0.17
APLFQ8IW19 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
APLFQ8IW19 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.13■□□□□ 0.17
APLFQ8IW19 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.13■□□□□ 0.17
APLFQ8IW19 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.13■□□□□ 0.17
APLFQ8IW19 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.13■□□□□ 0.17
APLFQ8IW19 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.13■□□□□ 0.17
APLFQ8IW19 AL353135.1-201ENST00000606729 504 ntBASIC16.13■□□□□ 0.17
APLFQ8IW19 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
APLFQ8IW19 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.13■□□□□ 0.17
APLFQ8IW19 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
APLFQ8IW19 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
APLFQ8IW19 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APLFQ8IW19 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.13■□□□□ 0.17
APLFQ8IW19 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
APLFQ8IW19 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
APLFQ8IW19 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
APLFQ8IW19 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 PTCHD3P3-201ENST00000403073 906 ntBASIC16.12■□□□□ 0.17
APLFQ8IW19 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
APLFQ8IW19 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.12■□□□□ 0.17
APLFQ8IW19 AC010507.1-201ENST00000633895 436 ntBASIC16.12■□□□□ 0.17
APLFQ8IW19 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
APLFQ8IW19 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.12■□□□□ 0.17
APLFQ8IW19 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
APLFQ8IW19 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms