Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.23□□□□□ -0.29
VPS13CQ709C8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.23□□□□□ -0.29
VPS13CQ709C8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 MIR5572-201ENST00000583188 137 ntBASIC13.23□□□□□ -0.29
VPS13CQ709C8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 NOC2LP2-201ENST00000407594 1944 ntBASIC13.23□□□□□ -0.29
VPS13CQ709C8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC120498.9-201ENST00000339021 3867 ntBASIC13.22□□□□□ -0.29
VPS13CQ709C8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC026410.3-201ENST00000514280 936 ntBASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 MIR4741-201ENST00000579822 90 ntBASIC13.22□□□□□ -0.29
VPS13CQ709C8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AL355334.1-201ENST00000417713 215 ntBASIC13.22□□□□□ -0.29
VPS13CQ709C8 MTX1P1-201ENST00000440904 838 ntBASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13CQ709C8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS13CQ709C8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13CQ709C8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13CQ709C8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13CQ709C8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13CQ709C8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13CQ709C8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13CQ709C8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS13CQ709C8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 AC016694.1-201ENST00000434179 700 ntBASIC13.21□□□□□ -0.29
VPS13CQ709C8 YBX1P6-201ENST00000442962 1002 ntBASIC13.21□□□□□ -0.29
VPS13CQ709C8 LDHBP1-201ENST00000455730 1119 ntBASIC13.21□□□□□ -0.29
VPS13CQ709C8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VPS13CQ709C8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS13CQ709C8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.21□□□□□ -0.3
VPS13CQ709C8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms