Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
TRNP1Q6NT89 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRNP1Q6NT89 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRNP1Q6NT89 AC046158.3-201ENST00000624947 2558 ntBASIC16.76■□□□□ 0.27
TRNP1Q6NT89 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRNP1Q6NT89 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.75■□□□□ 0.27
TRNP1Q6NT89 AZGP1P1-201ENST00000411909 902 ntBASIC16.75■□□□□ 0.27
TRNP1Q6NT89 METTL21AP1-201ENST00000438852 635 ntBASIC16.75■□□□□ 0.27
TRNP1Q6NT89 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 AC051619.7-201ENST00000568314 623 ntBASIC16.75■□□□□ 0.27
TRNP1Q6NT89 GPALPP1-207ENST00000611650 899 ntBASIC16.75■□□□□ 0.27
TRNP1Q6NT89 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 KRT8P37-201ENST00000451609 1420 ntBASIC16.75■□□□□ 0.27
TRNP1Q6NT89 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
TRNP1Q6NT89 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 SPDYE17-201ENST00000412399 783 ntBASIC16.74■□□□□ 0.27
TRNP1Q6NT89 SPDYE7P-202ENST00000420373 878 ntBASIC16.74■□□□□ 0.27
TRNP1Q6NT89 MTND6P24-201ENST00000440466 518 ntBASIC16.74■□□□□ 0.27
TRNP1Q6NT89 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 MIR4313-201ENST00000580760 101 ntBASIC16.74■□□□□ 0.27
TRNP1Q6NT89 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 AC026979.3-201ENST00000607315 403 ntBASIC16.74■□□□□ 0.27
TRNP1Q6NT89 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRNP1Q6NT89 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRNP1Q6NT89 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms