Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 AC007950.2-201ENST00000615045 2347 ntBASIC17.46■□□□□ 0.39
KRT39Q6A163 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT39Q6A163 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.46■□□□□ 0.39
KRT39Q6A163 RBPMS2P1-201ENST00000437762 623 ntBASIC17.46■□□□□ 0.39
KRT39Q6A163 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT39Q6A163 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.46■□□□□ 0.39
KRT39Q6A163 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT39Q6A163 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.46■□□□□ 0.39
KRT39Q6A163 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.46■□□□□ 0.39
KRT39Q6A163 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT39Q6A163 SNHG9-202ENST00000564014 471 ntBASIC17.46■□□□□ 0.39
KRT39Q6A163 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT39Q6A163 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.46■□□□□ 0.39
KRT39Q6A163 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT39Q6A163 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT39Q6A163 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT39Q6A163 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
KRT39Q6A163 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT39Q6A163 AL691432.1-201ENST00000596308 1422 ntBASIC17.46■□□□□ 0.39
KRT39Q6A163 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT39Q6A163 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KRT39Q6A163 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
KRT39Q6A163 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KRT39Q6A163 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT39Q6A163 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT39Q6A163 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT39Q6A163 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 AC011477.6-201ENST00000604980 1927 ntBASIC17.45■□□□□ 0.38
KRT39Q6A163 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
KRT39Q6A163 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT39Q6A163 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KRT39Q6A163 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT39Q6A163 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.45■□□□□ 0.38
KRT39Q6A163 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT39Q6A163 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT39Q6A163 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 AC243562.2-201ENST00000561247 970 ntBASIC17.45■□□□□ 0.38
KRT39Q6A163 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.45■□□□□ 0.38
KRT39Q6A163 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT39Q6A163 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KRT39Q6A163 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT39Q6A163 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT39Q6A163 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT39Q6A163 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT39Q6A163 AC134407.2-201ENST00000625089 1978 ntBASIC17.44■□□□□ 0.38
KRT39Q6A163 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT39Q6A163 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT39Q6A163 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.44■□□□□ 0.38
KRT39Q6A163 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT39Q6A163 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT39Q6A163 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT39Q6A163 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT39Q6A163 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT39Q6A163 DNAJB3-202ENST00000449667 1266 ntBASIC17.44■□□□□ 0.38
KRT39Q6A163 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT39Q6A163 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
KRT39Q6A163 AL596442.2-201ENST00000610240 980 ntBASIC17.44■□□□□ 0.38
KRT39Q6A163 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT39Q6A163 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KRT39Q6A163 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KRT39Q6A163 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 FER1L4-210ENST00000615531 5998 ntBASIC17.44■□□□□ 0.38
KRT39Q6A163 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT39Q6A163 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT39Q6A163 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT39Q6A163 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KRT39Q6A163 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms