Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 MTDHP3-201ENST00000594186 672 ntBASIC15.67■□□□□ 0.1
RNF220Q5VTB9 AL139424.1-201ENST00000607572 797 ntBASIC15.67■□□□□ 0.1
RNF220Q5VTB9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.66■□□□□ 0.1
RNF220Q5VTB9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 LINC00895-201ENST00000629028 1637 ntBASIC15.66■□□□□ 0.1
RNF220Q5VTB9 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 AC010327.5-201ENST00000586923 3061 ntBASIC15.66■□□□□ 0.1
RNF220Q5VTB9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 FGFR3P6-201ENST00000457012 610 ntBASIC15.66■□□□□ 0.1
RNF220Q5VTB9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 PRELID1P1-202ENST00000567272 903 ntBASIC15.66■□□□□ 0.1
RNF220Q5VTB9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 TERC-201ENST00000602385 541 ntBASIC15.66■□□□□ 0.1
RNF220Q5VTB9 REXO1L6P-202ENST00000619970 1078 ntBASIC15.66■□□□□ 0.1
RNF220Q5VTB9 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF220Q5VTB9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms