Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.16■□□□□ 0.18
LDLRAP1Q5SW96 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 RNA5SP410-201ENST00000516285 106 ntBASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 RARRES2P9-201ENST00000565168 469 ntBASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 AP3S2-216ENST00000617003 1561 ntBASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.15■□□□□ 0.18
LDLRAP1Q5SW96 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LDLRAP1Q5SW96 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
LDLRAP1Q5SW96 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LDLRAP1Q5SW96 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LDLRAP1Q5SW96 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.14■□□□□ 0.18
LDLRAP1Q5SW96 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LDLRAP1Q5SW96 AC026691.1-201ENST00000602502 2017 ntBASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 GPS2P2-201ENST00000430745 888 ntBASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 HLA-J-203ENST00000494367 1087 ntBASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 AP001059.3-201ENST00000619053 235 ntBASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 LINC00628-201ENST00000628516 1289 ntBASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 AC007950.2-201ENST00000615045 2347 ntBASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.14■□□□□ 0.17
LDLRAP1Q5SW96 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms