Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC009084.3-201ENST00000623356 437 ntBASIC13.8□□□□□ -0.2
LRRK2Q5S007 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 RN7SL8P-201ENST00000461771 266 ntBASIC13.8□□□□□ -0.2
LRRK2Q5S007 KRT18P43-201ENST00000469825 1281 ntBASIC13.8□□□□□ -0.2
LRRK2Q5S007 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 AL133466.1-201ENST00000447582 150 ntBASIC13.79□□□□□ -0.2
LRRK2Q5S007 CEP164P1-201ENST00000455142 418 ntBASIC13.79□□□□□ -0.2
LRRK2Q5S007 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 AC013355.1-201ENST00000562625 723 ntBASIC13.79□□□□□ -0.2
LRRK2Q5S007 AC005730.2-201ENST00000564549 1184 ntBASIC13.79□□□□□ -0.2
LRRK2Q5S007 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRK2Q5S007 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 RNA5SP486-201ENST00000515961 83 ntBASIC13.79□□□□□ -0.2
LRRK2Q5S007 IGLV3-15-201ENST00000518356 244 ntBASIC13.79□□□□□ -0.2
LRRK2Q5S007 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRK2Q5S007 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 RPL18P13-201ENST00000478088 569 ntBASIC13.78□□□□□ -0.2
LRRK2Q5S007 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms