Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 KRT8P48-201ENST00000515599 1220 ntBASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AC211486.1-202ENST00000416371 468 ntBASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AC004967.1-201ENST00000453589 447 ntBASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 HLA-J-202ENST00000469281 1241 ntBASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AC211476.1-201ENST00000503899 468 ntBASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 RARRES2P8-201ENST00000566335 367 ntBASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AC021097.1-201ENST00000607902 574 ntBASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AL691403.2-201ENST00000618460 490 ntBASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AC006058.4-201ENST00000624016 1670 ntBASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.42■□□□□ 0.22
KHDC1Q4VXA5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 ACTG1P14-201ENST00000446382 1122 ntBASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 AC243562.1-201ENST00000560672 389 ntBASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 AL135744.1-201ENST00000565098 629 ntBASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms