Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 AC087641.1-201ENST00000557561 1021 ntBASIC14.56□□□□□ -0.08
CCDC58Q4VC31 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 CR383656.2-201ENST00000548656 2254 ntBASIC14.55□□□□□ -0.08
CCDC58Q4VC31 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 SLC22A20-204ENST00000530038 1673 ntBASIC14.55□□□□□ -0.08
CCDC58Q4VC31 AL161772.1-201ENST00000610494 4412 ntBASIC14.55□□□□□ -0.08
CCDC58Q4VC31 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 KRT16P4-201ENST00000453883 522 ntBASIC14.55□□□□□ -0.08
CCDC58Q4VC31 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 AC099336.1-202ENST00000602961 463 ntBASIC14.55□□□□□ -0.08
CCDC58Q4VC31 AP001269.4-201ENST00000609611 512 ntBASIC14.55□□□□□ -0.08
CCDC58Q4VC31 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 AL592424.1-201ENST00000563624 1536 ntBASIC14.55□□□□□ -0.08
CCDC58Q4VC31 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC58Q4VC31 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 NUS1P2-201ENST00000417358 873 ntBASIC14.54□□□□□ -0.08
CCDC58Q4VC31 RBM17P3-201ENST00000417687 1192 ntBASIC14.54□□□□□ -0.08
CCDC58Q4VC31 HCG4-201ENST00000418983 998 ntBASIC14.54□□□□□ -0.08
CCDC58Q4VC31 PMS2P1-201ENST00000431037 1228 ntBASIC14.54□□□□□ -0.08
CCDC58Q4VC31 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 AP000867.3-201ENST00000524675 377 ntBASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 AC139887.3-201ENST00000568585 713 ntBASIC14.54□□□□□ -0.08
CCDC58Q4VC31 AC005412.3-201ENST00000580309 715 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms