Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 AC092171.3-201ENST00000610122 2651 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 AC007950.2-201ENST00000615045 2347 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 BNIP3P42-201ENST00000454982 569 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 BNIP3P29-201ENST00000598302 571 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 TMEM261P1-201ENST00000604899 340 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 WFDC1-204ENST00000613603 549 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 AC011447.5-201ENST00000616168 564 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 MIR6787-201ENST00000616675 61 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 AL109936.8-201ENST00000641772 604 ntBASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTC1Q2NKJ3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 AL589987.1-201ENST00000453380 819 ntBASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms