Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.34□□□□□ -0.11
NKX6-1P78426 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX6-1P78426 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.34□□□□□ -0.11
NKX6-1P78426 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX6-1P78426 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX6-1P78426 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
NKX6-1P78426 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.33□□□□□ -0.11
NKX6-1P78426 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.33□□□□□ -0.11
NKX6-1P78426 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
NKX6-1P78426 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-1P78426 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-1P78426 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-1P78426 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
NKX6-1P78426 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.33□□□□□ -0.11
NKX6-1P78426 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NKX6-1P78426 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-1P78426 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX6-1P78426 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NKX6-1P78426 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-1P78426 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-1P78426 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.33□□□□□ -0.12
NKX6-1P78426 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 OR8S1-201ENST00000310194 1080 ntBASIC14.33□□□□□ -0.12
NKX6-1P78426 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NKX6-1P78426 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.33□□□□□ -0.12
NKX6-1P78426 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-1P78426 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-1P78426 AC007274.1-201ENST00000439805 662 ntBASIC14.33□□□□□ -0.12
NKX6-1P78426 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 CR383656.12-201ENST00000549567 513 ntBASIC14.33□□□□□ -0.12
NKX6-1P78426 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.33□□□□□ -0.12
NKX6-1P78426 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NKX6-1P78426 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.33□□□□□ -0.12
NKX6-1P78426 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 AL359881.2-201ENST00000602973 570 ntBASIC14.33□□□□□ -0.12
NKX6-1P78426 MIR6080-201ENST00000617359 66 ntBASIC14.33□□□□□ -0.12
NKX6-1P78426 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NKX6-1P78426 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-1P78426 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-1P78426 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX6-1P78426 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NKX6-1P78426 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-1P78426 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NKX6-1P78426 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-1P78426 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NKX6-1P78426 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 AC005915.1-201ENST00000624912 2018 ntBASIC14.32□□□□□ -0.12
NKX6-1P78426 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NKX6-1P78426 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NKX6-1P78426 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NKX6-1P78426 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX6-1P78426 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX6-1P78426 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms