Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.33■□□□□ 0.04
GABREP78334 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
GABREP78334 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.33■□□□□ 0.04
GABREP78334 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.33■□□□□ 0.04
GABREP78334 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.33■□□□□ 0.04
GABREP78334 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.33■□□□□ 0.04
GABREP78334 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GABREP78334 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.33■□□□□ 0.04
GABREP78334 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABREP78334 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 MST1L-201ENST00000442552 2185 ntBASIC15.32■□□□□ 0.04
GABREP78334 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 GPAA1P2-202ENST00000606848 1787 ntBASIC15.32■□□□□ 0.04
GABREP78334 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.32■□□□□ 0.04
GABREP78334 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GABREP78334 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 ACTBP11-201ENST00000436287 1126 ntBASIC15.32■□□□□ 0.04
GABREP78334 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.32■□□□□ 0.04
GABREP78334 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.32■□□□□ 0.04
GABREP78334 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.32■□□□□ 0.04
GABREP78334 USP32P1-208ENST00000506594 1164 ntBASIC15.32■□□□□ 0.04
GABREP78334 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 AP002490.2-201ENST00000524791 560 ntBASIC15.32■□□□□ 0.04
GABREP78334 AC233724.13-201ENST00000598383 410 ntBASIC15.32■□□□□ 0.04
GABREP78334 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 PCDHA12-202ENST00000613593 2588 ntBASIC15.32■□□□□ 0.04
GABREP78334 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.32■□□□□ 0.04
GABREP78334 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GABREP78334 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABREP78334 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.31■□□□□ 0.04
GABREP78334 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
GABREP78334 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GABREP78334 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.31■□□□□ 0.04
GABREP78334 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 AC022211.2-201ENST00000585075 2527 ntBASIC15.31■□□□□ 0.04
GABREP78334 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms