Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.03■□□□□ 0.32
USP46P62068 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP46P62068 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
USP46P62068 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP46P62068 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP46P62068 AC009477.1-201ENST00000452936 217 ntBASIC17.03■□□□□ 0.32
USP46P62068 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.03■□□□□ 0.32
USP46P62068 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.03■□□□□ 0.32
USP46P62068 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.03■□□□□ 0.32
USP46P62068 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
USP46P62068 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP46P62068 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
USP46P62068 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP46P62068 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
USP46P62068 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP46P62068 DOC2GP-204ENST00000639052 2548 ntBASIC17.03■□□□□ 0.32
USP46P62068 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.03■□□□□ 0.32
USP46P62068 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP46P62068 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.03■□□□□ 0.32
USP46P62068 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP46P62068 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.02■□□□□ 0.32
USP46P62068 AC022144.1-201ENST00000602255 1580 ntBASIC17.02■□□□□ 0.32
USP46P62068 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
USP46P62068 ME2P1-201ENST00000426028 1970 ntBASIC17.02■□□□□ 0.32
USP46P62068 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.02■□□□□ 0.32
USP46P62068 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.02■□□□□ 0.32
USP46P62068 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
USP46P62068 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.02■□□□□ 0.32
USP46P62068 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.02■□□□□ 0.32
USP46P62068 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.02■□□□□ 0.32
USP46P62068 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.02■□□□□ 0.32
USP46P62068 POU5F1P6-201ENST00000466990 990 ntBASIC17.02■□□□□ 0.32
USP46P62068 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.02■□□□□ 0.32
USP46P62068 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.02■□□□□ 0.32
USP46P62068 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC17.02■□□□□ 0.32
USP46P62068 AC009407.1-201ENST00000568958 598 ntBASIC17.02■□□□□ 0.32
USP46P62068 MIR4321-201ENST00000592276 80 ntBASIC17.02■□□□□ 0.32
USP46P62068 LINC02560-201ENST00000596379 459 ntBASIC17.02■□□□□ 0.32
USP46P62068 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.02■□□□□ 0.32
USP46P62068 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP46P62068 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
USP46P62068 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.02■□□□□ 0.31
USP46P62068 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
USP46P62068 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP46P62068 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.02■□□□□ 0.31
USP46P62068 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP46P62068 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
USP46P62068 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
USP46P62068 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
USP46P62068 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
USP46P62068 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
USP46P62068 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.01■□□□□ 0.31
USP46P62068 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.01■□□□□ 0.31
USP46P62068 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
USP46P62068 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.01■□□□□ 0.31
USP46P62068 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.01■□□□□ 0.31
USP46P62068 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
USP46P62068 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.01■□□□□ 0.31
USP46P62068 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.01■□□□□ 0.31
USP46P62068 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.01■□□□□ 0.31
USP46P62068 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.01■□□□□ 0.31
USP46P62068 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
USP46P62068 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
USP46P62068 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.01■□□□□ 0.31
USP46P62068 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.01■□□□□ 0.31
USP46P62068 REXO1L8P-201ENST00000604378 1897 ntBASIC17.01■□□□□ 0.31
USP46P62068 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.01■□□□□ 0.31
USP46P62068 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.01■□□□□ 0.31
USP46P62068 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
USP46P62068 AL592424.1-201ENST00000563624 1536 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms