Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 HCG4B-203ENST00000450128 991 ntBASIC14.26□□□□□ -0.13
SEC61A1P61619 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.26□□□□□ -0.13
SEC61A1P61619 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 AC040169.1-201ENST00000565382 521 ntBASIC14.26□□□□□ -0.13
SEC61A1P61619 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC61A1P61619 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.26□□□□□ -0.13
SEC61A1P61619 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.26□□□□□ -0.13
SEC61A1P61619 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC61A1P61619 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SEC61A1P61619 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC61A1P61619 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC61A1P61619 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.25□□□□□ -0.13
SEC61A1P61619 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC61A1P61619 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 PRSS29P-201ENST00000440800 595 ntBASIC14.25□□□□□ -0.13
SEC61A1P61619 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC61A1P61619 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC61A1P61619 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC61A1P61619 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.25□□□□□ -0.13
SEC61A1P61619 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 AC010327.4-202ENST00000591484 748 ntBASIC14.25□□□□□ -0.13
SEC61A1P61619 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC61A1P61619 GPALPP1-207ENST00000611650 899 ntBASIC14.25□□□□□ -0.13
SEC61A1P61619 AC010654.1-201ENST00000615722 808 ntBASIC14.25□□□□□ -0.13
SEC61A1P61619 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC61A1P61619 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC61A1P61619 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SEC61A1P61619 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC61A1P61619 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61A1P61619 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SEC61A1P61619 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SEC61A1P61619 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC61A1P61619 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC61A1P61619 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SEC61A1P61619 YBX2P1-201ENST00000394192 760 ntBASIC14.24□□□□□ -0.13
SEC61A1P61619 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC61A1P61619 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC61A1P61619 GGTLC5P-201ENST00000617623 998 ntBASIC14.24□□□□□ -0.13
SEC61A1P61619 AC139530.3-201ENST00000620344 690 ntBASIC14.24□□□□□ -0.13
SEC61A1P61619 AC010507.1-201ENST00000633895 436 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms