Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.35■□□□□ 0.85
KCNQ4P56696 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
KCNQ4P56696 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNQ4P56696 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.35■□□□□ 0.85
KCNQ4P56696 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.35■□□□□ 0.85
KCNQ4P56696 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 AC068880.1-201ENST00000507289 2297 ntBASIC20.35■□□□□ 0.85
KCNQ4P56696 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ4P56696 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.34■□□□□ 0.85
KCNQ4P56696 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.34■□□□□ 0.85
KCNQ4P56696 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.34■□□□□ 0.85
KCNQ4P56696 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.34■□□□□ 0.85
KCNQ4P56696 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.34■□□□□ 0.85
KCNQ4P56696 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KCNQ4P56696 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
KCNQ4P56696 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
KCNQ4P56696 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.34■□□□□ 0.85
KCNQ4P56696 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.34■□□□□ 0.85
KCNQ4P56696 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
KCNQ4P56696 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.34■□□□□ 0.85
KCNQ4P56696 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.34■□□□□ 0.85
KCNQ4P56696 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.34■□□□□ 0.85
KCNQ4P56696 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KCNQ4P56696 GGT3P-204ENST00000453783 1664 ntBASIC20.34■□□□□ 0.85
KCNQ4P56696 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.34■□□□□ 0.85
KCNQ4P56696 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KCNQ4P56696 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNQ4P56696 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
KCNQ4P56696 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.33■□□□□ 0.85
KCNQ4P56696 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.33■□□□□ 0.85
KCNQ4P56696 LINC01144-201ENST00000626198 1710 ntBASIC20.33■□□□□ 0.85
KCNQ4P56696 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.33■□□□□ 0.85
KCNQ4P56696 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 RNF216P1-203ENST00000404404 2427 ntBASIC20.33■□□□□ 0.85
KCNQ4P56696 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
KCNQ4P56696 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
KCNQ4P56696 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
KCNQ4P56696 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
KCNQ4P56696 C2orf27AP3-201ENST00000434123 579 ntBASIC20.33■□□□□ 0.85
KCNQ4P56696 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.33■□□□□ 0.85
KCNQ4P56696 Z93015.1-201ENST00000451718 390 ntBASIC20.33■□□□□ 0.85
KCNQ4P56696 RPL13AP25-201ENST00000484130 612 ntBASIC20.33■□□□□ 0.85
KCNQ4P56696 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.33■□□□□ 0.85
KCNQ4P56696 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.33■□□□□ 0.85
KCNQ4P56696 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.33■□□□□ 0.85
KCNQ4P56696 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 U62317.3-201ENST00000608319 855 ntBASIC20.33■□□□□ 0.85
KCNQ4P56696 AL354718.3-201ENST00000616414 581 ntBASIC20.33■□□□□ 0.85
KCNQ4P56696 CR382287.1-201ENST00000623954 586 ntBASIC20.33■□□□□ 0.85
KCNQ4P56696 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.33■□□□□ 0.85
KCNQ4P56696 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNQ4P56696 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KCNQ4P56696 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.33■□□□□ 0.84
KCNQ4P56696 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
KCNQ4P56696 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KCNQ4P56696 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KCNQ4P56696 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KCNQ4P56696 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KCNQ4P56696 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNQ4P56696 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNQ4P56696 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
KCNQ4P56696 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
KCNQ4P56696 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNQ4P56696 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KCNQ4P56696 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
KCNQ4P56696 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KCNQ4P56696 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNQ4P56696 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNQ4P56696 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNQ4P56696 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNQ4P56696 FXNP2-201ENST00000411625 547 ntBASIC20.32■□□□□ 0.84
KCNQ4P56696 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.32■□□□□ 0.84
KCNQ4P56696 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms