Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.44□□□□□ -0.1
GFRA1P56159 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
GFRA1P56159 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.44□□□□□ -0.1
GFRA1P56159 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.44□□□□□ -0.1
GFRA1P56159 TERF1P3-201ENST00000505638 1227 ntBASIC14.44□□□□□ -0.1
GFRA1P56159 SERBP1P5-201ENST00000510079 1181 ntBASIC14.44□□□□□ -0.1
GFRA1P56159 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.44□□□□□ -0.1
GFRA1P56159 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.44□□□□□ -0.1
GFRA1P56159 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.44□□□□□ -0.1
GFRA1P56159 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.44□□□□□ -0.1
GFRA1P56159 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.44□□□□□ -0.1
GFRA1P56159 AC044860.1-202ENST00000559481 777 ntBASIC14.44□□□□□ -0.1
GFRA1P56159 AC138761.1-201ENST00000584393 385 ntBASIC14.44□□□□□ -0.1
GFRA1P56159 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.44□□□□□ -0.1
GFRA1P56159 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.44□□□□□ -0.1
GFRA1P56159 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GFRA1P56159 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.44□□□□□ -0.1
GFRA1P56159 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.44□□□□□ -0.1
GFRA1P56159 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GFRA1P56159 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GFRA1P56159 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
GFRA1P56159 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GFRA1P56159 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
GFRA1P56159 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GFRA1P56159 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GFRA1P56159 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 AC006449.5-201ENST00000610658 2098 ntBASIC14.43□□□□□ -0.1
GFRA1P56159 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GFRA1P56159 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GFRA1P56159 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.43□□□□□ -0.1
GFRA1P56159 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
GFRA1P56159 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GFRA1P56159 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.43□□□□□ -0.1
GFRA1P56159 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.43□□□□□ -0.1
GFRA1P56159 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.43□□□□□ -0.1
GFRA1P56159 SDHAP3-202ENST00000515467 728 ntBASIC14.43□□□□□ -0.1
GFRA1P56159 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
GFRA1P56159 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.43□□□□□ -0.1
GFRA1P56159 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.43□□□□□ -0.1
GFRA1P56159 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
GFRA1P56159 AC134407.2-201ENST00000625089 1978 ntBASIC14.43□□□□□ -0.1
GFRA1P56159 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.43□□□□□ -0.1
GFRA1P56159 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 OR6D1P-203ENST00000641209 4860 ntBASIC14.43□□□□□ -0.1
GFRA1P56159 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GFRA1P56159 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GFRA1P56159 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
GFRA1P56159 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 AC124067.4-201ENST00000519691 2379 ntBASIC14.42□□□□□ -0.1
GFRA1P56159 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.42□□□□□ -0.1
GFRA1P56159 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GFRA1P56159 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms