Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 PMS2P4-201ENST00000412466 1052 ntBASIC14.11□□□□□ -0.15
ATP1B3P54709 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.11□□□□□ -0.15
ATP1B3P54709 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.11□□□□□ -0.15
ATP1B3P54709 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.11□□□□□ -0.15
ATP1B3P54709 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.11□□□□□ -0.15
ATP1B3P54709 AL160237.2-201ENST00000556165 472 ntBASIC14.11□□□□□ -0.15
ATP1B3P54709 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.11□□□□□ -0.15
ATP1B3P54709 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.11□□□□□ -0.15
ATP1B3P54709 AL031055.1-201ENST00000606362 631 ntBASIC14.11□□□□□ -0.15
ATP1B3P54709 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.11□□□□□ -0.15
ATP1B3P54709 AC148477.8-201ENST00000624298 468 ntBASIC14.11□□□□□ -0.15
ATP1B3P54709 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ATP1B3P54709 AC005622.1-201ENST00000636801 1703 ntBASIC14.11□□□□□ -0.15
ATP1B3P54709 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ATP1B3P54709 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ATP1B3P54709 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ATP1B3P54709 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 AC010491.1-201ENST00000563101 2797 ntBASIC14.11□□□□□ -0.15
ATP1B3P54709 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ATP1B3P54709 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ATP1B3P54709 U82695.1-201ENST00000635752 1889 ntBASIC14.1□□□□□ -0.15
ATP1B3P54709 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.1□□□□□ -0.15
ATP1B3P54709 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
ATP1B3P54709 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ATP1B3P54709 RNU1-129P-201ENST00000384064 167 ntBASIC14.1□□□□□ -0.15
ATP1B3P54709 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
ATP1B3P54709 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 CRYGEP-201ENST00000412192 528 ntBASIC14.1□□□□□ -0.15
ATP1B3P54709 AL031284.1-201ENST00000419297 478 ntBASIC14.1□□□□□ -0.15
ATP1B3P54709 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 AC079781.3-201ENST00000449110 356 ntBASIC14.1□□□□□ -0.15
ATP1B3P54709 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.1□□□□□ -0.15
ATP1B3P54709 AL603832.2-201ENST00000566195 2125 ntBASIC14.1□□□□□ -0.15
ATP1B3P54709 MIR3909-201ENST00000579518 119 ntBASIC14.1□□□□□ -0.15
ATP1B3P54709 U1.21-201ENST00000580816 167 ntBASIC14.1□□□□□ -0.15
ATP1B3P54709 RN7SL510P-201ENST00000581311 263 ntBASIC14.1□□□□□ -0.15
ATP1B3P54709 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
ATP1B3P54709 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.1□□□□□ -0.15
ATP1B3P54709 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ATP1B3P54709 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.1□□□□□ -0.15
ATP1B3P54709 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
ATP1B3P54709 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ATP1B3P54709 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.1□□□□□ -0.15
ATP1B3P54709 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATP1B3P54709 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.1□□□□□ -0.15
ATP1B3P54709 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ATP1B3P54709 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
ATP1B3P54709 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.09□□□□□ -0.15
ATP1B3P54709 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.09□□□□□ -0.15
ATP1B3P54709 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ATP1B3P54709 AC013268.4-201ENST00000637413 2228 ntBASIC14.09□□□□□ -0.15
ATP1B3P54709 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms