Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC109322.1-201ENST00000524499 1264 ntBASIC16.05■□□□□ 0.16
ZNF140P52738 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
ZNF140P52738 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.05■□□□□ 0.16
ZNF140P52738 AP001160.2-201ENST00000596071 487 ntBASIC16.05■□□□□ 0.16
ZNF140P52738 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 AC003101.2-201ENST00000612557 442 ntBASIC16.05■□□□□ 0.16
ZNF140P52738 LINC00628-201ENST00000628516 1289 ntBASIC16.05■□□□□ 0.16
ZNF140P52738 AC079781.4-201ENST00000641908 219 ntBASIC16.05■□□□□ 0.16
ZNF140P52738 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF140P52738 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ZNF140P52738 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF140P52738 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ZNF140P52738 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF140P52738 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ZNF140P52738 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF140P52738 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF140P52738 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ZNF140P52738 TSEN15P1-201ENST00000423257 515 ntBASIC16.04■□□□□ 0.16
ZNF140P52738 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF140P52738 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF140P52738 MIR4453-201ENST00000584019 89 ntBASIC16.04■□□□□ 0.16
ZNF140P52738 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
ZNF140P52738 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF140P52738 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ZNF140P52738 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ZNF140P52738 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF140P52738 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ZNF140P52738 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 REXO1L1P-202ENST00000608646 1974 ntBASIC16.04■□□□□ 0.16
ZNF140P52738 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.04■□□□□ 0.16
ZNF140P52738 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF140P52738 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF140P52738 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF140P52738 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ZNF140P52738 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.03■□□□□ 0.16
ZNF140P52738 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.03■□□□□ 0.16
ZNF140P52738 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ZNF140P52738 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.03■□□□□ 0.16
ZNF140P52738 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 AL133215.2-201ENST00000609242 977 ntBASIC16.03■□□□□ 0.16
ZNF140P52738 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 PAUPAR-201ENST00000630360 2965 ntBASIC16.03■□□□□ 0.16
ZNF140P52738 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF140P52738 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF140P52738 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF140P52738 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF140P52738 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms