Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.53■□□□□ 0.4
PDE6CP51160 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDE6CP51160 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6CP51160 CYMP-203ENST00000474680 1263 ntBASIC17.53■□□□□ 0.4
PDE6CP51160 HLA-J-203ENST00000494367 1087 ntBASIC17.53■□□□□ 0.4
PDE6CP51160 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
PDE6CP51160 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6CP51160 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.53■□□□□ 0.4
PDE6CP51160 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6CP51160 AL135744.1-201ENST00000565098 629 ntBASIC17.53■□□□□ 0.4
PDE6CP51160 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6CP51160 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6CP51160 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.53■□□□□ 0.4
PDE6CP51160 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6CP51160 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6CP51160 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PDE6CP51160 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6CP51160 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDE6CP51160 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PDE6CP51160 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.53■□□□□ 0.4
PDE6CP51160 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PDE6CP51160 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PDE6CP51160 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PDE6CP51160 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.52■□□□□ 0.4
PDE6CP51160 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6CP51160 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.52■□□□□ 0.4
PDE6CP51160 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6CP51160 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PDE6CP51160 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6CP51160 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
PDE6CP51160 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6CP51160 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6CP51160 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6CP51160 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.52■□□□□ 0.4
PDE6CP51160 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6CP51160 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6CP51160 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.52■□□□□ 0.4
PDE6CP51160 AL627223.1-201ENST00000416693 442 ntBASIC17.52■□□□□ 0.4
PDE6CP51160 AC005237.2-201ENST00000434368 219 ntBASIC17.52■□□□□ 0.4
PDE6CP51160 AL592309.1-201ENST00000443127 649 ntBASIC17.52■□□□□ 0.4
PDE6CP51160 AC093724.1-201ENST00000448659 1027 ntBASIC17.52■□□□□ 0.4
PDE6CP51160 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.52■□□□□ 0.4
PDE6CP51160 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.52■□□□□ 0.4
PDE6CP51160 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.52■□□□□ 0.4
PDE6CP51160 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.52■□□□□ 0.4
PDE6CP51160 AC009093.7-201ENST00000623853 1223 ntBASIC17.52■□□□□ 0.4
PDE6CP51160 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6CP51160 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6CP51160 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PDE6CP51160 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.52■□□□□ 0.4
PDE6CP51160 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PDE6CP51160 AL365203.3-201ENST00000609742 2057 ntBASIC17.52■□□□□ 0.39
PDE6CP51160 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDE6CP51160 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.52■□□□□ 0.39
PDE6CP51160 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.52■□□□□ 0.39
PDE6CP51160 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PDE6CP51160 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 AL603832.2-201ENST00000566195 2125 ntBASIC17.51■□□□□ 0.39
PDE6CP51160 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6CP51160 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6CP51160 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6CP51160 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6CP51160 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.51■□□□□ 0.39
PDE6CP51160 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.51■□□□□ 0.39
PDE6CP51160 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.51■□□□□ 0.39
PDE6CP51160 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PDE6CP51160 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PDE6CP51160 KRT8P23-201ENST00000560090 1207 ntBASIC17.51■□□□□ 0.39
PDE6CP51160 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.51■□□□□ 0.39
PDE6CP51160 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.51■□□□□ 0.39
PDE6CP51160 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms