Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.31■□□□□ 0.04
KNTC1P50748 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
KNTC1P50748 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.31■□□□□ 0.04
KNTC1P50748 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KNTC1P50748 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.31■□□□□ 0.04
KNTC1P50748 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.31■□□□□ 0.04
KNTC1P50748 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.31■□□□□ 0.04
KNTC1P50748 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.31■□□□□ 0.04
KNTC1P50748 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.31■□□□□ 0.04
KNTC1P50748 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
KNTC1P50748 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KNTC1P50748 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
KNTC1P50748 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
KNTC1P50748 LINC02012-201ENST00000608206 1725 ntBASIC15.3■□□□□ 0.04
KNTC1P50748 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
KNTC1P50748 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
KNTC1P50748 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.3■□□□□ 0.04
KNTC1P50748 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
KNTC1P50748 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
KNTC1P50748 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.3■□□□□ 0.04
KNTC1P50748 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.3■□□□□ 0.04
KNTC1P50748 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.3■□□□□ 0.04
KNTC1P50748 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
KNTC1P50748 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
KNTC1P50748 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KNTC1P50748 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.29■□□□□ 0.04
KNTC1P50748 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KNTC1P50748 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.29■□□□□ 0.04
KNTC1P50748 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 AC245100.5-201ENST00000452108 331 ntBASIC15.29■□□□□ 0.04
KNTC1P50748 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.29■□□□□ 0.04
KNTC1P50748 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.29■□□□□ 0.04
KNTC1P50748 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KNTC1P50748 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
KNTC1P50748 AC133539.2-201ENST00000604757 467 ntBASIC15.29■□□□□ 0.04
KNTC1P50748 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.29■□□□□ 0.04
KNTC1P50748 AC005622.1-201ENST00000636801 1703 ntBASIC15.29■□□□□ 0.04
KNTC1P50748 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
KNTC1P50748 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.29■□□□□ 0.04
KNTC1P50748 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.29■□□□□ 0.04
KNTC1P50748 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KNTC1P50748 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KNTC1P50748 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.29■□□□□ 0.04
KNTC1P50748 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KNTC1P50748 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KNTC1P50748 AC006033.1-201ENST00000440505 426 ntBASIC15.29■□□□□ 0.04
KNTC1P50748 AL355864.2-201ENST00000447420 863 ntBASIC15.29■□□□□ 0.04
KNTC1P50748 AC007551.1-201ENST00000457394 519 ntBASIC15.29■□□□□ 0.04
KNTC1P50748 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.29■□□□□ 0.04
KNTC1P50748 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.29■□□□□ 0.04
KNTC1P50748 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.29■□□□□ 0.04
KNTC1P50748 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.29■□□□□ 0.04
KNTC1P50748 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KNTC1P50748 PCGF3-213ENST00000620529 1899 ntBASIC15.29■□□□□ 0.04
KNTC1P50748 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms