Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 REXO1L8P-201ENST00000604378 1897 ntBASIC17.78■□□□□ 0.44
CPT1AP50416 AC009053.2-201ENST00000563701 2365 ntBASIC17.77■□□□□ 0.44
CPT1AP50416 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CPT1AP50416 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CPT1AP50416 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CPT1AP50416 AP001282.1-201ENST00000531301 1499 ntBASIC17.77■□□□□ 0.44
CPT1AP50416 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CPT1AP50416 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CPT1AP50416 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.77■□□□□ 0.44
CPT1AP50416 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.77■□□□□ 0.44
CPT1AP50416 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.77■□□□□ 0.44
CPT1AP50416 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.77■□□□□ 0.44
CPT1AP50416 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.77■□□□□ 0.44
CPT1AP50416 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.77■□□□□ 0.44
CPT1AP50416 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.77■□□□□ 0.44
CPT1AP50416 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.77■□□□□ 0.44
CPT1AP50416 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 ENPP7P5-201ENST00000541031 1031 ntBASIC17.77■□□□□ 0.44
CPT1AP50416 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.77■□□□□ 0.44
CPT1AP50416 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.77■□□□□ 0.44
CPT1AP50416 MIR5189-201ENST00000577370 114 ntBASIC17.77■□□□□ 0.44
CPT1AP50416 AL022328.1-201ENST00000610050 478 ntBASIC17.77■□□□□ 0.44
CPT1AP50416 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.77■□□□□ 0.44
CPT1AP50416 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.77■□□□□ 0.44
CPT1AP50416 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.77■□□□□ 0.44
CPT1AP50416 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.77■□□□□ 0.44
CPT1AP50416 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPT1AP50416 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPT1AP50416 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.77■□□□□ 0.43
CPT1AP50416 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.77■□□□□ 0.43
CPT1AP50416 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPT1AP50416 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.77■□□□□ 0.43
CPT1AP50416 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CPT1AP50416 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.77■□□□□ 0.43
CPT1AP50416 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
CPT1AP50416 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.77■□□□□ 0.43
CPT1AP50416 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CPT1AP50416 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CPT1AP50416 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CPT1AP50416 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.76■□□□□ 0.43
CPT1AP50416 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CPT1AP50416 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPT1AP50416 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.76■□□□□ 0.43
CPT1AP50416 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.76■□□□□ 0.43
CPT1AP50416 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.76■□□□□ 0.43
CPT1AP50416 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.76■□□□□ 0.43
CPT1AP50416 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.76■□□□□ 0.43
CPT1AP50416 TDH-203ENST00000531764 1110 ntBASIC17.76■□□□□ 0.43
CPT1AP50416 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.76■□□□□ 0.43
CPT1AP50416 AL359711.2-201ENST00000563105 872 ntBASIC17.76■□□□□ 0.43
CPT1AP50416 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.76■□□□□ 0.43
CPT1AP50416 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.76■□□□□ 0.43
CPT1AP50416 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.76■□□□□ 0.43
CPT1AP50416 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CPT1AP50416 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.76■□□□□ 0.43
CPT1AP50416 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.76■□□□□ 0.43
CPT1AP50416 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPT1AP50416 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CPT1AP50416 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.75■□□□□ 0.43
CPT1AP50416 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPT1AP50416 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.75■□□□□ 0.43
CPT1AP50416 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 ANKRD19P-201ENST00000338192 862 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms