Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.44□□□□□ -0.1
SRP9P49458 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SRP9P49458 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.44□□□□□ -0.1
SRP9P49458 AC004790.2-201ENST00000623588 572 ntBASIC14.44□□□□□ -0.1
SRP9P49458 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.44□□□□□ -0.1
SRP9P49458 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRP9P49458 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.44□□□□□ -0.1
SRP9P49458 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRP9P49458 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRP9P49458 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRP9P49458 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SRP9P49458 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.44□□□□□ -0.1
SRP9P49458 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRP9P49458 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
SRP9P49458 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SRP9P49458 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.44□□□□□ -0.1
SRP9P49458 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRP9P49458 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SRP9P49458 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRP9P49458 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SRP9P49458 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SRP9P49458 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SRP9P49458 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SRP9P49458 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 FLJ16779-201ENST00000612722 7638 ntBASIC14.43□□□□□ -0.1
SRP9P49458 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SRP9P49458 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.43□□□□□ -0.1
SRP9P49458 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.43□□□□□ -0.1
SRP9P49458 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRP9P49458 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SRP9P49458 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SRP9P49458 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SRP9P49458 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SRP9P49458 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
SRP9P49458 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.42□□□□□ -0.1
SRP9P49458 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
SRP9P49458 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.42□□□□□ -0.1
SRP9P49458 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 FAM45BP-202ENST00000592932 1624 ntBASIC14.42□□□□□ -0.1
SRP9P49458 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.42□□□□□ -0.1
SRP9P49458 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SRP9P49458 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.42□□□□□ -0.1
SRP9P49458 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.42□□□□□ -0.1
SRP9P49458 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.42□□□□□ -0.1
SRP9P49458 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.42□□□□□ -0.1
SRP9P49458 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.42□□□□□ -0.1
SRP9P49458 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.42□□□□□ -0.1
SRP9P49458 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.42□□□□□ -0.1
SRP9P49458 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SRP9P49458 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.42□□□□□ -0.1
SRP9P49458 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.42□□□□□ -0.1
SRP9P49458 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SRP9P49458 AC138035.3-201ENST00000622706 2791 ntBASIC14.42□□□□□ -0.1
SRP9P49458 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRP9P49458 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SRP9P49458 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms