Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.13■□□□□ 0.33
BRCC3P46736 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.13■□□□□ 0.33
BRCC3P46736 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCC3P46736 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
BRCC3P46736 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.13■□□□□ 0.33
BRCC3P46736 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
BRCC3P46736 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.13■□□□□ 0.33
BRCC3P46736 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
BRCC3P46736 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.13■□□□□ 0.33
BRCC3P46736 AC008494.3-201ENST00000606615 944 ntBASIC17.13■□□□□ 0.33
BRCC3P46736 AC074044.1-201ENST00000609673 707 ntBASIC17.13■□□□□ 0.33
BRCC3P46736 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCC3P46736 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BRCC3P46736 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.13■□□□□ 0.33
BRCC3P46736 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BRCC3P46736 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BRCC3P46736 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BRCC3P46736 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
BRCC3P46736 SLC7A15P-201ENST00000424028 1363 ntBASIC17.13■□□□□ 0.33
BRCC3P46736 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BRCC3P46736 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
BRCC3P46736 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
BRCC3P46736 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
BRCC3P46736 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
BRCC3P46736 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
BRCC3P46736 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BRCC3P46736 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BRCC3P46736 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.12■□□□□ 0.33
BRCC3P46736 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.12■□□□□ 0.33
BRCC3P46736 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BRCC3P46736 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.12■□□□□ 0.33
BRCC3P46736 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.12■□□□□ 0.33
BRCC3P46736 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.12■□□□□ 0.33
BRCC3P46736 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.12■□□□□ 0.33
BRCC3P46736 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
BRCC3P46736 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 AC007431.3-201ENST00000623221 587 ntBASIC17.12■□□□□ 0.33
BRCC3P46736 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BRCC3P46736 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.12■□□□□ 0.33
BRCC3P46736 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.12■□□□□ 0.33
BRCC3P46736 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCC3P46736 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.12■□□□□ 0.33
BRCC3P46736 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.12■□□□□ 0.33
BRCC3P46736 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.12■□□□□ 0.33
BRCC3P46736 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.12■□□□□ 0.33
BRCC3P46736 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BRCC3P46736 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.12■□□□□ 0.33
BRCC3P46736 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.12■□□□□ 0.33
BRCC3P46736 AC134407.2-201ENST00000625089 1978 ntBASIC17.11■□□□□ 0.33
BRCC3P46736 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.11■□□□□ 0.33
BRCC3P46736 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BRCC3P46736 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCC3P46736 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.11■□□□□ 0.33
BRCC3P46736 AC087499.6-201ENST00000411576 835 ntBASIC17.11■□□□□ 0.33
BRCC3P46736 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 EEF1DP4-201ENST00000446006 880 ntBASIC17.11■□□□□ 0.33
BRCC3P46736 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.11■□□□□ 0.33
BRCC3P46736 AC055876.2-201ENST00000531834 546 ntBASIC17.11■□□□□ 0.33
BRCC3P46736 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
BRCC3P46736 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
BRCC3P46736 LINC01115-203ENST00000606068 577 ntBASIC17.11■□□□□ 0.33
BRCC3P46736 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCC3P46736 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.11■□□□□ 0.33
BRCC3P46736 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BRCC3P46736 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BRCC3P46736 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
BRCC3P46736 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.11■□□□□ 0.33
BRCC3P46736 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms