Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.17□□□□□ -0.14
GDNFP39905 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.17□□□□□ -0.14
GDNFP39905 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.17□□□□□ -0.14
GDNFP39905 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 AL139288.1-201ENST00000623748 933 ntBASIC14.17□□□□□ -0.14
GDNFP39905 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
GDNFP39905 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.17□□□□□ -0.14
GDNFP39905 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 C8orf49-201ENST00000525043 1968 ntBASIC14.16□□□□□ -0.14
GDNFP39905 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 AC026748.1-201ENST00000624349 3251 ntBASIC14.16□□□□□ -0.14
GDNFP39905 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 LINC01144-201ENST00000626198 1710 ntBASIC14.16□□□□□ -0.14
GDNFP39905 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.16□□□□□ -0.14
GDNFP39905 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
GDNFP39905 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.16□□□□□ -0.14
GDNFP39905 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.16□□□□□ -0.14
GDNFP39905 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.16□□□□□ -0.14
GDNFP39905 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 AL022326.1-202ENST00000641533 845 ntBASIC14.16□□□□□ -0.14
GDNFP39905 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.16□□□□□ -0.14
GDNFP39905 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.16□□□□□ -0.14
GDNFP39905 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.16□□□□□ -0.14
GDNFP39905 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDNFP39905 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.16□□□□□ -0.14
GDNFP39905 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
GDNFP39905 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.16□□□□□ -0.14
GDNFP39905 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
GDNFP39905 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.15□□□□□ -0.14
GDNFP39905 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
GDNFP39905 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.15□□□□□ -0.14
GDNFP39905 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GDNFP39905 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.15□□□□□ -0.14
GDNFP39905 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.15□□□□□ -0.14
GDNFP39905 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GDNFP39905 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.15□□□□□ -0.14
GDNFP39905 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
GDNFP39905 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
GDNFP39905 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.15□□□□□ -0.14
GDNFP39905 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.15□□□□□ -0.14
GDNFP39905 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.15□□□□□ -0.14
GDNFP39905 AC021087.4-201ENST00000563761 564 ntBASIC14.15□□□□□ -0.14
GDNFP39905 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GDNFP39905 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.15□□□□□ -0.14
GDNFP39905 LINC01711-201ENST00000598340 967 ntBASIC14.15□□□□□ -0.14
GDNFP39905 TP73-AS1-207ENST00000624167 988 ntBASIC14.15□□□□□ -0.14
GDNFP39905 MIR600HG-201ENST00000449175 5984 ntBASIC14.15□□□□□ -0.14
GDNFP39905 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.15□□□□□ -0.14
GDNFP39905 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms