Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.27■□□□□ 0.84
COL15A1P39059 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.27■□□□□ 0.84
COL15A1P39059 AL022328.1-201ENST00000610050 478 ntBASIC20.27■□□□□ 0.84
COL15A1P39059 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.27■□□□□ 0.84
COL15A1P39059 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL15A1P39059 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL15A1P39059 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL15A1P39059 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
COL15A1P39059 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
COL15A1P39059 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
COL15A1P39059 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL15A1P39059 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.26■□□□□ 0.83
COL15A1P39059 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL15A1P39059 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.26■□□□□ 0.83
COL15A1P39059 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.26■□□□□ 0.83
COL15A1P39059 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.26■□□□□ 0.83
COL15A1P39059 AC068587.3-201ENST00000526613 355 ntBASIC20.26■□□□□ 0.83
COL15A1P39059 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COL15A1P39059 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.26■□□□□ 0.83
COL15A1P39059 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.26■□□□□ 0.83
COL15A1P39059 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 REXO1L8P-201ENST00000604378 1897 ntBASIC20.26■□□□□ 0.83
COL15A1P39059 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.26■□□□□ 0.83
COL15A1P39059 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.26■□□□□ 0.83
COL15A1P39059 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 ALOX12P2-203ENST00000570921 1945 ntBASIC20.26■□□□□ 0.83
COL15A1P39059 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL15A1P39059 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
COL15A1P39059 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL15A1P39059 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.25■□□□□ 0.83
COL15A1P39059 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COL15A1P39059 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COL15A1P39059 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.25■□□□□ 0.83
COL15A1P39059 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.25■□□□□ 0.83
COL15A1P39059 AL355994.2-201ENST00000447882 704 ntBASIC20.25■□□□□ 0.83
COL15A1P39059 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.25■□□□□ 0.83
COL15A1P39059 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.25■□□□□ 0.83
COL15A1P39059 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.25■□□□□ 0.83
COL15A1P39059 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL15A1P39059 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.25■□□□□ 0.83
COL15A1P39059 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL15A1P39059 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COL15A1P39059 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.25■□□□□ 0.83
COL15A1P39059 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL15A1P39059 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL15A1P39059 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL15A1P39059 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL15A1P39059 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
COL15A1P39059 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.24■□□□□ 0.83
COL15A1P39059 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 AC005229.1-201ENST00000392885 409 ntBASIC20.24■□□□□ 0.83
COL15A1P39059 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.24■□□□□ 0.83
COL15A1P39059 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.24■□□□□ 0.83
COL15A1P39059 KRT18P64-201ENST00000434946 1219 ntBASIC20.24■□□□□ 0.83
COL15A1P39059 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.24■□□□□ 0.83
COL15A1P39059 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 AL133338.1-201ENST00000565695 1517 ntBASIC20.24■□□□□ 0.83
COL15A1P39059 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.24■□□□□ 0.83
COL15A1P39059 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.24■□□□□ 0.83
COL15A1P39059 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.24■□□□□ 0.83
COL15A1P39059 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COL15A1P39059 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms