Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
PDE6BP35913 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE6BP35913 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 AC006033.1-201ENST00000440505 426 ntBASIC19.73■□□□□ 0.75
PDE6BP35913 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.73■□□□□ 0.75
PDE6BP35913 SLED1-202ENST00000512051 380 ntBASIC19.73■□□□□ 0.75
PDE6BP35913 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE6BP35913 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDE6BP35913 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.73■□□□□ 0.75
PDE6BP35913 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
PDE6BP35913 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDE6BP35913 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
PDE6BP35913 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDE6BP35913 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 AL133373.2-201ENST00000623187 2828 ntBASIC19.72■□□□□ 0.75
PDE6BP35913 AL592424.1-201ENST00000563624 1536 ntBASIC19.72■□□□□ 0.75
PDE6BP35913 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.72■□□□□ 0.75
PDE6BP35913 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE6BP35913 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.72■□□□□ 0.75
PDE6BP35913 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDE6BP35913 AC092506.1-202ENST00000401022 528 ntBASIC19.72■□□□□ 0.75
PDE6BP35913 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.72■□□□□ 0.75
PDE6BP35913 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE6BP35913 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE6BP35913 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.72■□□□□ 0.75
PDE6BP35913 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.72■□□□□ 0.75
PDE6BP35913 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.72■□□□□ 0.75
PDE6BP35913 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE6BP35913 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE6BP35913 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.72■□□□□ 0.75
PDE6BP35913 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE6BP35913 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PDE6BP35913 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE6BP35913 AC141586.5-201ENST00000624546 2050 ntBASIC19.72■□□□□ 0.75
PDE6BP35913 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6BP35913 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDE6BP35913 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 NOC2LP2-201ENST00000407594 1944 ntBASIC19.71■□□□□ 0.75
PDE6BP35913 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PDE6BP35913 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.71■□□□□ 0.75
PDE6BP35913 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.71■□□□□ 0.75
PDE6BP35913 C2orf27AP3-201ENST00000434123 579 ntBASIC19.71■□□□□ 0.75
PDE6BP35913 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.71■□□□□ 0.75
PDE6BP35913 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.71■□□□□ 0.75
PDE6BP35913 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.71■□□□□ 0.75
PDE6BP35913 AL118558.3-201ENST00000607414 1079 ntBASIC19.71■□□□□ 0.75
PDE6BP35913 AL354718.3-201ENST00000616414 581 ntBASIC19.71■□□□□ 0.75
PDE6BP35913 CR382287.1-201ENST00000623954 586 ntBASIC19.71■□□□□ 0.75
PDE6BP35913 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PDE6BP35913 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6BP35913 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6BP35913 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.7■□□□□ 0.74
PDE6BP35913 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.7■□□□□ 0.74
PDE6BP35913 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PDE6BP35913 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.7■□□□□ 0.74
PDE6BP35913 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 ACKR1-201ENST00000368121 1240 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms