Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.11■□□□□ 0.33
PCK1P35558 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PCK1P35558 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.11■□□□□ 0.33
PCK1P35558 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.11■□□□□ 0.33
PCK1P35558 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
PCK1P35558 AC112191.1-201ENST00000523689 701 ntBASIC17.11■□□□□ 0.33
PCK1P35558 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.11■□□□□ 0.33
PCK1P35558 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.11■□□□□ 0.33
PCK1P35558 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.11■□□□□ 0.33
PCK1P35558 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCK1P35558 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCK1P35558 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.11■□□□□ 0.33
PCK1P35558 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCK1P35558 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.11■□□□□ 0.33
PCK1P35558 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.11■□□□□ 0.33
PCK1P35558 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.11■□□□□ 0.33
PCK1P35558 AL365203.3-201ENST00000609742 2057 ntBASIC17.11■□□□□ 0.33
PCK1P35558 AL603832.2-201ENST00000566195 2125 ntBASIC17.11■□□□□ 0.33
PCK1P35558 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCK1P35558 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
PCK1P35558 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCK1P35558 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.1■□□□□ 0.33
PCK1P35558 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.1■□□□□ 0.33
PCK1P35558 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 AC073439.1-201ENST00000624121 1774 ntBASIC17.1■□□□□ 0.33
PCK1P35558 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PCK1P35558 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.1■□□□□ 0.33
PCK1P35558 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.1■□□□□ 0.33
PCK1P35558 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.1■□□□□ 0.33
PCK1P35558 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCK1P35558 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.1■□□□□ 0.33
PCK1P35558 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCK1P35558 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCK1P35558 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.1■□□□□ 0.33
PCK1P35558 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.1■□□□□ 0.33
PCK1P35558 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCK1P35558 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.1■□□□□ 0.33
PCK1P35558 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.1■□□□□ 0.33
PCK1P35558 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCK1P35558 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.09■□□□□ 0.33
PCK1P35558 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.09■□□□□ 0.33
PCK1P35558 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.09■□□□□ 0.33
PCK1P35558 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
PCK1P35558 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCK1P35558 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.09■□□□□ 0.33
PCK1P35558 MIR648-201ENST00000385046 94 ntBASIC17.09■□□□□ 0.33
PCK1P35558 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.09■□□□□ 0.33
PCK1P35558 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.09■□□□□ 0.33
PCK1P35558 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.09■□□□□ 0.33
PCK1P35558 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.09■□□□□ 0.33
PCK1P35558 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.09■□□□□ 0.33
PCK1P35558 AC099522.2-201ENST00000607001 744 ntBASIC17.09■□□□□ 0.33
PCK1P35558 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.09■□□□□ 0.33
PCK1P35558 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCK1P35558 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms