Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.48■□□□□ 0.55
CLCN1P35523 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.48■□□□□ 0.55
CLCN1P35523 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCN1P35523 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.48■□□□□ 0.55
CLCN1P35523 MIR3652-201ENST00000579335 131 ntBASIC18.48■□□□□ 0.55
CLCN1P35523 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.48■□□□□ 0.55
CLCN1P35523 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLCN1P35523 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCN1P35523 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCN1P35523 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCN1P35523 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 AC079776.2-201ENST00000641154 1609 ntBASIC18.48■□□□□ 0.55
CLCN1P35523 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCN1P35523 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLCN1P35523 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCN1P35523 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCN1P35523 AC063926.3-201ENST00000624734 5658 ntBASIC18.47■□□□□ 0.55
CLCN1P35523 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
CLCN1P35523 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLCN1P35523 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
CLCN1P35523 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCN1P35523 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 SIGLEC30P-201ENST00000455569 941 ntBASIC18.47■□□□□ 0.55
CLCN1P35523 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 AL732292.2-201ENST00000609649 430 ntBASIC18.47■□□□□ 0.55
CLCN1P35523 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCN1P35523 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLCN1P35523 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCN1P35523 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CLCN1P35523 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CLCN1P35523 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLCN1P35523 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCN1P35523 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLCN1P35523 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 CR383656.2-201ENST00000548656 2254 ntBASIC18.47■□□□□ 0.55
CLCN1P35523 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN1P35523 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLCN1P35523 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLCN1P35523 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCN1P35523 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCN1P35523 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN1P35523 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLCN1P35523 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN1P35523 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLCN1P35523 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCN1P35523 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN1P35523 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN1P35523 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLCN1P35523 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms