Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 AC107890.1-201ENST00000422478 521 ntBASIC17.64■□□□□ 0.41
RFX1P22670 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.64■□□□□ 0.41
RFX1P22670 KLF2P3-201ENST00000451977 1087 ntBASIC17.64■□□□□ 0.41
RFX1P22670 RN7SL589P-201ENST00000481268 310 ntBASIC17.64■□□□□ 0.41
RFX1P22670 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.64■□□□□ 0.41
RFX1P22670 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX1P22670 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX1P22670 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.64■□□□□ 0.41
RFX1P22670 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RFX1P22670 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX1P22670 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.64■□□□□ 0.41
RFX1P22670 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX1P22670 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.64■□□□□ 0.41
RFX1P22670 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RFX1P22670 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RFX1P22670 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFX1P22670 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.64■□□□□ 0.41
RFX1P22670 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RFX1P22670 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX1P22670 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
RFX1P22670 AC069224.1-201ENST00000566372 1715 ntBASIC17.64■□□□□ 0.41
RFX1P22670 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX1P22670 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RFX1P22670 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RFX1P22670 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.63■□□□□ 0.41
RFX1P22670 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
RFX1P22670 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RFX1P22670 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.63■□□□□ 0.41
RFX1P22670 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RFX1P22670 AL355306.1-201ENST00000415580 579 ntBASIC17.63■□□□□ 0.41
RFX1P22670 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.63■□□□□ 0.41
RFX1P22670 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.63■□□□□ 0.41
RFX1P22670 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RFX1P22670 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.63■□□□□ 0.41
RFX1P22670 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.63■□□□□ 0.41
RFX1P22670 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RFX1P22670 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 AC016027.1-202ENST00000607927 1699 ntBASIC17.63■□□□□ 0.41
RFX1P22670 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.63■□□□□ 0.41
RFX1P22670 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 CDC14C-201ENST00000428251 1719 ntBASIC17.63■□□□□ 0.41
RFX1P22670 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RFX1P22670 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.63■□□□□ 0.41
RFX1P22670 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 WASH6P-202ENST00000359512 1437 ntBASIC17.63■□□□□ 0.41
RFX1P22670 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.63■□□□□ 0.41
RFX1P22670 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX1P22670 LINC02199-201ENST00000506655 2702 ntBASIC17.63■□□□□ 0.41
RFX1P22670 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.63■□□□□ 0.41
RFX1P22670 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RFX1P22670 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX1P22670 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 LINC02447-202ENST00000501888 2146 ntBASIC17.62■□□□□ 0.41
RFX1P22670 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.62■□□□□ 0.41
RFX1P22670 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RFX1P22670 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.62■□□□□ 0.41
RFX1P22670 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RFX1P22670 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.62■□□□□ 0.41
RFX1P22670 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.62■□□□□ 0.41
RFX1P22670 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RFX1P22670 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.62■□□□□ 0.41
RFX1P22670 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.62■□□□□ 0.41
RFX1P22670 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
RFX1P22670 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.62■□□□□ 0.41
RFX1P22670 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX1P22670 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 AC027307.3-201ENST00000594262 1100 ntBASIC17.62■□□□□ 0.41
RFX1P22670 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.62■□□□□ 0.41
RFX1P22670 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms