Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ERCC2P18074 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ERCC2P18074 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ERCC2P18074 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.64■□□□□ 0.25
ERCC2P18074 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.64■□□□□ 0.25
ERCC2P18074 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.64■□□□□ 0.25
ERCC2P18074 AC026150.2-201ENST00000564693 1156 ntBASIC16.64■□□□□ 0.25
ERCC2P18074 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
ERCC2P18074 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC2P18074 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ERCC2P18074 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC2P18074 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ERCC2P18074 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC2P18074 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC2P18074 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ERCC2P18074 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.63■□□□□ 0.25
ERCC2P18074 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ERCC2P18074 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.63■□□□□ 0.25
ERCC2P18074 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.63■□□□□ 0.25
ERCC2P18074 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.63■□□□□ 0.25
ERCC2P18074 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 AC079781.4-201ENST00000641908 219 ntBASIC16.63■□□□□ 0.25
ERCC2P18074 AC134407.2-201ENST00000625089 1978 ntBASIC16.63■□□□□ 0.25
ERCC2P18074 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
ERCC2P18074 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ERCC2P18074 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.63■□□□□ 0.25
ERCC2P18074 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC2P18074 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 AC007950.2-201ENST00000615045 2347 ntBASIC16.63■□□□□ 0.25
ERCC2P18074 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC2P18074 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 AL691432.1-201ENST00000596308 1422 ntBASIC16.62■□□□□ 0.25
ERCC2P18074 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 AP001282.1-201ENST00000531301 1499 ntBASIC16.62■□□□□ 0.25
ERCC2P18074 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms