Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.41■□□□□ 0.38
SYN1P17600 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 REXO1L8P-201ENST00000604378 1897 ntBASIC17.4■□□□□ 0.38
SYN1P17600 U82695.1-201ENST00000635752 1889 ntBASIC17.4■□□□□ 0.38
SYN1P17600 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.4■□□□□ 0.38
SYN1P17600 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.4■□□□□ 0.38
SYN1P17600 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SYN1P17600 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SYN1P17600 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 MIR1202-201ENST00000408529 83 ntBASIC17.4■□□□□ 0.38
SYN1P17600 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.4■□□□□ 0.38
SYN1P17600 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.4■□□□□ 0.38
SYN1P17600 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SYN1P17600 MIR4321-201ENST00000592276 80 ntBASIC17.4■□□□□ 0.38
SYN1P17600 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 AC091812.3-201ENST00000621362 345 ntBASIC17.4■□□□□ 0.38
SYN1P17600 AC026471.1-201ENST00000564629 3026 ntBASIC17.4■□□□□ 0.38
SYN1P17600 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.4■□□□□ 0.38
SYN1P17600 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.4■□□□□ 0.38
SYN1P17600 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.4■□□□□ 0.38
SYN1P17600 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.4■□□□□ 0.38
SYN1P17600 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.4■□□□□ 0.38
SYN1P17600 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYN1P17600 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.39■□□□□ 0.38
SYN1P17600 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
SYN1P17600 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SYN1P17600 AL391256.1-201ENST00000443260 1855 ntBASIC17.39■□□□□ 0.38
SYN1P17600 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SYN1P17600 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.39■□□□□ 0.37
SYN1P17600 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SYN1P17600 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SYN1P17600 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SYN1P17600 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.39■□□□□ 0.37
SYN1P17600 CYP46A4P-201ENST00000414953 267 ntBASIC17.39■□□□□ 0.37
SYN1P17600 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 AC022137.2-201ENST00000503482 481 ntBASIC17.39■□□□□ 0.37
SYN1P17600 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.39■□□□□ 0.37
SYN1P17600 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.39■□□□□ 0.37
SYN1P17600 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.39■□□□□ 0.37
SYN1P17600 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.39■□□□□ 0.37
SYN1P17600 CU633904.3-201ENST00000624042 1029 ntBASIC17.39■□□□□ 0.37
SYN1P17600 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.39■□□□□ 0.37
SYN1P17600 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYN1P17600 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SYN1P17600 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
SYN1P17600 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.38■□□□□ 0.37
SYN1P17600 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.38■□□□□ 0.37
SYN1P17600 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SYN1P17600 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SYN1P17600 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SYN1P17600 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.38■□□□□ 0.37
SYN1P17600 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.38■□□□□ 0.37
SYN1P17600 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SYN1P17600 RN7SL720P-201ENST00000488178 304 ntBASIC17.38■□□□□ 0.37
SYN1P17600 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.38■□□□□ 0.37
SYN1P17600 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.38■□□□□ 0.37
SYN1P17600 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.38■□□□□ 0.37
SYN1P17600 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms