Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.26□□□□□ -0.13
UBCP0CG48 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.26□□□□□ -0.13
UBCP0CG48 PRSS29P-201ENST00000440800 595 ntBASIC14.26□□□□□ -0.13
UBCP0CG48 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
UBCP0CG48 AC018712.1-201ENST00000455767 687 ntBASIC14.26□□□□□ -0.13
UBCP0CG48 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.26□□□□□ -0.13
UBCP0CG48 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.26□□□□□ -0.13
UBCP0CG48 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
UBCP0CG48 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
UBCP0CG48 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.26□□□□□ -0.13
UBCP0CG48 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.26□□□□□ -0.13
UBCP0CG48 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UBCP0CG48 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.25□□□□□ -0.13
UBCP0CG48 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UBCP0CG48 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.25□□□□□ -0.13
UBCP0CG48 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UBCP0CG48 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.25□□□□□ -0.13
UBCP0CG48 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UBCP0CG48 AC022532.1-201ENST00000624563 1728 ntBASIC14.25□□□□□ -0.13
UBCP0CG48 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UBCP0CG48 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.25□□□□□ -0.13
UBCP0CG48 HMGA1P7-201ENST00000406908 502 ntBASIC14.25□□□□□ -0.13
UBCP0CG48 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UBCP0CG48 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UBCP0CG48 KRT18P67-201ENST00000432816 1264 ntBASIC14.25□□□□□ -0.13
UBCP0CG48 FAM197Y8-203ENST00000450145 560 ntBASIC14.25□□□□□ -0.13
UBCP0CG48 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.25□□□□□ -0.13
UBCP0CG48 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UBCP0CG48 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.25□□□□□ -0.13
UBCP0CG48 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
UBCP0CG48 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.25□□□□□ -0.13
UBCP0CG48 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.25□□□□□ -0.13
UBCP0CG48 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UBCP0CG48 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBCP0CG48 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.24□□□□□ -0.13
UBCP0CG48 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UBCP0CG48 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.24□□□□□ -0.13
UBCP0CG48 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.24□□□□□ -0.13
UBCP0CG48 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
UBCP0CG48 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UBCP0CG48 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.24□□□□□ -0.13
UBCP0CG48 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.24□□□□□ -0.13
UBCP0CG48 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 AC092919.2-201ENST00000623631 1645 ntBASIC14.24□□□□□ -0.13
UBCP0CG48 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UBCP0CG48 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBCP0CG48 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms