Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
COL5A2P05997 AL133267.1-201ENST00000398220 340 ntBASIC20.87■□□□□ 0.93
COL5A2P05997 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 MIR1202-201ENST00000408529 83 ntBASIC20.87■□□□□ 0.93
COL5A2P05997 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC20.87■□□□□ 0.93
COL5A2P05997 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.87■□□□□ 0.93
COL5A2P05997 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.87■□□□□ 0.93
COL5A2P05997 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.87■□□□□ 0.93
COL5A2P05997 HOMER2P2-201ENST00000451621 847 ntBASIC20.87■□□□□ 0.93
COL5A2P05997 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
COL5A2P05997 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
COL5A2P05997 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
COL5A2P05997 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 CHMP4BP1-201ENST00000556017 588 ntBASIC20.87■□□□□ 0.93
COL5A2P05997 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.87■□□□□ 0.93
COL5A2P05997 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COL5A2P05997 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
COL5A2P05997 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.87■□□□□ 0.93
COL5A2P05997 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL5A2P05997 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
COL5A2P05997 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.86■□□□□ 0.93
COL5A2P05997 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.86■□□□□ 0.93
COL5A2P05997 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.86■□□□□ 0.93
COL5A2P05997 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL5A2P05997 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.86■□□□□ 0.93
COL5A2P05997 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.86■□□□□ 0.93
COL5A2P05997 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
COL5A2P05997 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.86■□□□□ 0.93
COL5A2P05997 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.86■□□□□ 0.93
COL5A2P05997 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.86■□□□□ 0.93
COL5A2P05997 KRT18P25-201ENST00000508931 1278 ntBASIC20.86■□□□□ 0.93
COL5A2P05997 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC20.86■□□□□ 0.93
COL5A2P05997 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
COL5A2P05997 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.86■□□□□ 0.93
COL5A2P05997 AC020914.3-201ENST00000594712 304 ntBASIC20.86■□□□□ 0.93
COL5A2P05997 AC006453.4-201ENST00000636949 1252 ntBASIC20.86■□□□□ 0.93
COL5A2P05997 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
COL5A2P05997 AC007613.1-201ENST00000572811 2597 ntBASIC20.86■□□□□ 0.93
COL5A2P05997 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL5A2P05997 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COL5A2P05997 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL5A2P05997 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL5A2P05997 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.85■□□□□ 0.93
COL5A2P05997 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.85■□□□□ 0.93
COL5A2P05997 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL5A2P05997 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.85■□□□□ 0.93
COL5A2P05997 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.85■□□□□ 0.93
COL5A2P05997 FXNP2-201ENST00000411625 547 ntBASIC20.85■□□□□ 0.93
COL5A2P05997 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.85■□□□□ 0.93
COL5A2P05997 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.85■□□□□ 0.93
COL5A2P05997 CNN2P10-201ENST00000443067 918 ntBASIC20.85■□□□□ 0.93
COL5A2P05997 HSPB1P2-201ENST00000448722 546 ntBASIC20.85■□□□□ 0.93
COL5A2P05997 AC005077.2-201ENST00000449786 690 ntBASIC20.85■□□□□ 0.93
COL5A2P05997 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.85■□□□□ 0.93
COL5A2P05997 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COL5A2P05997 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COL5A2P05997 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
COL5A2P05997 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.85■□□□□ 0.93
COL5A2P05997 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
COL5A2P05997 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL5A2P05997 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
COL5A2P05997 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL5A2P05997 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL5A2P05997 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL5A2P05997 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL5A2P05997 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.85■□□□□ 0.93
COL5A2P05997 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL5A2P05997 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL5A2P05997 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.85■□□□□ 0.93
COL5A2P05997 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL5A2P05997 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 KRT8P35-201ENST00000483942 1338 ntBASIC20.84■□□□□ 0.93
COL5A2P05997 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.84■□□□□ 0.93
COL5A2P05997 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
COL5A2P05997 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
COL5A2P05997 ACTBP8-201ENST00000403258 1108 ntBASIC20.84■□□□□ 0.93
COL5A2P05997 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.84■□□□□ 0.93
COL5A2P05997 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC20.84■□□□□ 0.93
COL5A2P05997 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC20.84■□□□□ 0.93
COL5A2P05997 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms