Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR3DP05423 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 MRPS18AP1-201ENST00000414458 589 ntBASIC19.32■□□□□ 0.68
POLR3DP05423 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR3DP05423 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR3DP05423 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR3DP05423 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
POLR3DP05423 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR3DP05423 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR3DP05423 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.32■□□□□ 0.68
POLR3DP05423 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR3DP05423 AC008761.3-201ENST00000624803 892 ntBASIC19.32■□□□□ 0.68
POLR3DP05423 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
POLR3DP05423 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
POLR3DP05423 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
POLR3DP05423 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR3DP05423 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
POLR3DP05423 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
POLR3DP05423 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
POLR3DP05423 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLR3DP05423 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLR3DP05423 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.31■□□□□ 0.68
POLR3DP05423 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.31■□□□□ 0.68
POLR3DP05423 FAM207CP-201ENST00000443486 507 ntBASIC19.31■□□□□ 0.68
POLR3DP05423 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.31■□□□□ 0.68
POLR3DP05423 COX20P2-201ENST00000452636 358 ntBASIC19.31■□□□□ 0.68
POLR3DP05423 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 POU5F1P6-201ENST00000466990 990 ntBASIC19.31■□□□□ 0.68
POLR3DP05423 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.31■□□□□ 0.68
POLR3DP05423 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.31■□□□□ 0.68
POLR3DP05423 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLR3DP05423 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
POLR3DP05423 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3DP05423 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLR3DP05423 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.31■□□□□ 0.68
POLR3DP05423 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLR3DP05423 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3DP05423 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
POLR3DP05423 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3DP05423 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR3DP05423 AC087499.5-201ENST00000452760 1342 ntBASIC19.3■□□□□ 0.68
POLR3DP05423 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
POLR3DP05423 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR3DP05423 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3DP05423 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
POLR3DP05423 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR3DP05423 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.3■□□□□ 0.68
POLR3DP05423 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3DP05423 AL365330.1-201ENST00000607459 531 ntBASIC19.3■□□□□ 0.68
POLR3DP05423 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR3DP05423 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR3DP05423 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR3DP05423 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms