Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA1P02708 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.45■□□□□ 0.38
CHRNA1P02708 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.45■□□□□ 0.38
CHRNA1P02708 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
CHRNA1P02708 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNA1P02708 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.45■□□□□ 0.38
CHRNA1P02708 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNA1P02708 ME2P1-201ENST00000426028 1970 ntBASIC17.45■□□□□ 0.38
CHRNA1P02708 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHRNA1P02708 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA1P02708 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CHRNA1P02708 KRT8P22-201ENST00000562317 1415 ntBASIC17.45■□□□□ 0.38
CHRNA1P02708 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA1P02708 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA1P02708 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA1P02708 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA1P02708 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA1P02708 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNA1P02708 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CHRNA1P02708 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNA1P02708 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 TOMM22P5-201ENST00000416399 439 ntBASIC17.44■□□□□ 0.38
CHRNA1P02708 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.44■□□□□ 0.38
CHRNA1P02708 FAM86LP-201ENST00000478302 853 ntBASIC17.44■□□□□ 0.38
CHRNA1P02708 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.44■□□□□ 0.38
CHRNA1P02708 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 AP005482.1-201ENST00000563722 1273 ntBASIC17.44■□□□□ 0.38
CHRNA1P02708 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 BRI3BPP1-201ENST00000594224 787 ntBASIC17.44■□□□□ 0.38
CHRNA1P02708 AC133539.2-201ENST00000604757 467 ntBASIC17.44■□□□□ 0.38
CHRNA1P02708 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNA1P02708 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHRNA1P02708 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNA1P02708 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNA1P02708 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA1P02708 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA1P02708 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHRNA1P02708 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA1P02708 AC134407.2-201ENST00000625089 1978 ntBASIC17.43■□□□□ 0.38
CHRNA1P02708 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CHRNA1P02708 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHRNA1P02708 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA1P02708 AC022494.1-201ENST00000466044 728 ntBASIC17.43■□□□□ 0.38
CHRNA1P02708 SLC25A47P1-201ENST00000531577 414 ntBASIC17.43■□□□□ 0.38
CHRNA1P02708 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA1P02708 AL359711.2-201ENST00000563105 872 ntBASIC17.43■□□□□ 0.38
CHRNA1P02708 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.43■□□□□ 0.38
CHRNA1P02708 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA1P02708 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHRNA1P02708 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.43■□□□□ 0.38
CHRNA1P02708 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA1P02708 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHRNA1P02708 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNA1P02708 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHRNA1P02708 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CHRNA1P02708 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNA1P02708 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 AC018665.1-201ENST00000622927 1362 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms