Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.13■□□□□ 0.33
ZBED1O96006 AC024267.1-201ENST00000582320 895 ntBASIC17.13■□□□□ 0.33
ZBED1O96006 AC018529.1-201ENST00000613063 361 ntBASIC17.13■□□□□ 0.33
ZBED1O96006 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.13■□□□□ 0.33
ZBED1O96006 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 REXO1L8P-201ENST00000604378 1897 ntBASIC17.13■□□□□ 0.33
ZBED1O96006 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.13■□□□□ 0.33
ZBED1O96006 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.13■□□□□ 0.33
ZBED1O96006 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZBED1O96006 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.13■□□□□ 0.33
ZBED1O96006 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ZBED1O96006 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.12■□□□□ 0.33
ZBED1O96006 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 AL596257.1-201ENST00000641463 2694 ntBASIC17.12■□□□□ 0.33
ZBED1O96006 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZBED1O96006 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 LINC02199-201ENST00000506655 2702 ntBASIC17.12■□□□□ 0.33
ZBED1O96006 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.12■□□□□ 0.33
ZBED1O96006 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 CNN2P2-201ENST00000443536 909 ntBASIC17.12■□□□□ 0.33
ZBED1O96006 CNN2P3-201ENST00000450201 906 ntBASIC17.12■□□□□ 0.33
ZBED1O96006 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 AC015911.4-201ENST00000588022 1070 ntBASIC17.12■□□□□ 0.33
ZBED1O96006 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.12■□□□□ 0.33
ZBED1O96006 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
ZBED1O96006 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZBED1O96006 MIR6080-201ENST00000617359 66 ntBASIC17.12■□□□□ 0.33
ZBED1O96006 AL136317.3-201ENST00000618497 906 ntBASIC17.12■□□□□ 0.33
ZBED1O96006 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.12■□□□□ 0.33
ZBED1O96006 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.12■□□□□ 0.33
ZBED1O96006 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.12■□□□□ 0.33
ZBED1O96006 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.12■□□□□ 0.33
ZBED1O96006 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.12■□□□□ 0.33
ZBED1O96006 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.12■□□□□ 0.33
ZBED1O96006 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZBED1O96006 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZBED1O96006 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZBED1O96006 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 AC008677.1-201ENST00000519230 1561 ntBASIC17.11■□□□□ 0.33
ZBED1O96006 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZBED1O96006 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
ZBED1O96006 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ZBED1O96006 PCDHA1-201ENST00000378133 2726 ntBASIC17.11■□□□□ 0.33
ZBED1O96006 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.11■□□□□ 0.33
ZBED1O96006 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ZBED1O96006 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.11■□□□□ 0.33
ZBED1O96006 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.11■□□□□ 0.33
ZBED1O96006 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.11■□□□□ 0.33
ZBED1O96006 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.11■□□□□ 0.33
ZBED1O96006 AC061975.2-201ENST00000581722 295 ntBASIC17.11■□□□□ 0.33
ZBED1O96006 AL365330.1-201ENST00000607459 531 ntBASIC17.11■□□□□ 0.33
ZBED1O96006 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.11■□□□□ 0.33
ZBED1O96006 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.11■□□□□ 0.33
ZBED1O96006 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZBED1O96006 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZBED1O96006 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.11■□□□□ 0.33
ZBED1O96006 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms