Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPTM1O96005 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLPTM1O96005 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPTM1O96005 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPTM1O96005 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.37■□□□□ 0.05
CLPTM1O96005 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.37■□□□□ 0.05
CLPTM1O96005 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CLPTM1O96005 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPTM1O96005 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.37■□□□□ 0.05
CLPTM1O96005 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.37■□□□□ 0.05
CLPTM1O96005 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPTM1O96005 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPTM1O96005 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPTM1O96005 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CLPTM1O96005 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLPTM1O96005 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLPTM1O96005 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.36■□□□□ 0.05
CLPTM1O96005 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.36■□□□□ 0.05
CLPTM1O96005 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CLPTM1O96005 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.36■□□□□ 0.05
CLPTM1O96005 AL353801.3-201ENST00000609898 542 ntBASIC15.36■□□□□ 0.05
CLPTM1O96005 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLPTM1O96005 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.36■□□□□ 0.05
CLPTM1O96005 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.36■□□□□ 0.05
CLPTM1O96005 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.36■□□□□ 0.05
CLPTM1O96005 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 AC069224.1-201ENST00000566372 1715 ntBASIC15.36■□□□□ 0.05
CLPTM1O96005 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CLPTM1O96005 AC005912.2-201ENST00000619492 2400 ntBASIC15.36■□□□□ 0.05
CLPTM1O96005 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.36■□□□□ 0.05
CLPTM1O96005 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPTM1O96005 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.36■□□□□ 0.05
CLPTM1O96005 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.36■□□□□ 0.05
CLPTM1O96005 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLPTM1O96005 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLPTM1O96005 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLPTM1O96005 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 NSUN5P1-202ENST00000421140 1535 ntBASIC15.35■□□□□ 0.05
CLPTM1O96005 NSUN5P2-203ENST00000457352 1529 ntBASIC15.35■□□□□ 0.05
CLPTM1O96005 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLPTM1O96005 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CLPTM1O96005 IGHV3-47-201ENST00000425060 335 ntBASIC15.35■□□□□ 0.05
CLPTM1O96005 AC246785.2-201ENST00000432512 513 ntBASIC15.35■□□□□ 0.05
CLPTM1O96005 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLPTM1O96005 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.35■□□□□ 0.05
CLPTM1O96005 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 PRELID1P1-202ENST00000567272 903 ntBASIC15.35■□□□□ 0.05
CLPTM1O96005 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.35■□□□□ 0.05
CLPTM1O96005 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.35■□□□□ 0.05
CLPTM1O96005 AC005336.2-201ENST00000593183 939 ntBASIC15.35■□□□□ 0.05
CLPTM1O96005 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPTM1O96005 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CLPTM1O96005 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPTM1O96005 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPTM1O96005 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPTM1O96005 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms