Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 AZGP1P1-201ENST00000411909 902 ntBASIC16.91■□□□□ 0.3
BEST1O76090 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.91■□□□□ 0.3
BEST1O76090 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.91■□□□□ 0.3
BEST1O76090 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST1O76090 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST1O76090 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 AC044860.1-202ENST00000559481 777 ntBASIC16.91■□□□□ 0.3
BEST1O76090 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
BEST1O76090 MIR4745-201ENST00000577608 62 ntBASIC16.91■□□□□ 0.3
BEST1O76090 RN7SL204P-201ENST00000582831 262 ntBASIC16.91■□□□□ 0.3
BEST1O76090 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 AC092364.2-202ENST00000597012 1073 ntBASIC16.91■□□□□ 0.3
BEST1O76090 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
BEST1O76090 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BEST1O76090 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BEST1O76090 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST1O76090 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.91■□□□□ 0.3
BEST1O76090 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BEST1O76090 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BEST1O76090 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BEST1O76090 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BEST1O76090 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST1O76090 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST1O76090 AC024909.3-201ENST00000611513 2257 ntBASIC16.9■□□□□ 0.3
BEST1O76090 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST1O76090 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BEST1O76090 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
BEST1O76090 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST1O76090 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BEST1O76090 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST1O76090 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 AC236430.1-201ENST00000402231 743 ntBASIC16.9■□□□□ 0.3
BEST1O76090 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 EEF1DP4-201ENST00000446006 880 ntBASIC16.9■□□□□ 0.3
BEST1O76090 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST1O76090 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST1O76090 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BEST1O76090 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.9■□□□□ 0.3
BEST1O76090 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
BEST1O76090 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST1O76090 AP001282.1-201ENST00000531301 1499 ntBASIC16.9■□□□□ 0.3
BEST1O76090 AC010491.1-201ENST00000563101 2797 ntBASIC16.9■□□□□ 0.3
BEST1O76090 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
BEST1O76090 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BEST1O76090 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST1O76090 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.89■□□□□ 0.3
BEST1O76090 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST1O76090 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST1O76090 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BEST1O76090 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST1O76090 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST1O76090 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.89■□□□□ 0.29
BEST1O76090 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST1O76090 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST1O76090 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 AC018695.7-201ENST00000624587 2492 ntBASIC16.89■□□□□ 0.29
BEST1O76090 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST1O76090 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.89■□□□□ 0.29
BEST1O76090 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST1O76090 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
BEST1O76090 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST1O76090 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST1O76090 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.89■□□□□ 0.29
BEST1O76090 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST1O76090 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.89■□□□□ 0.29
BEST1O76090 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.89■□□□□ 0.29
BEST1O76090 RN7SL618P-201ENST00000477850 296 ntBASIC16.89■□□□□ 0.29
BEST1O76090 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.89■□□□□ 0.29
BEST1O76090 AL603832.2-201ENST00000566195 2125 ntBASIC16.89■□□□□ 0.29
BEST1O76090 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms