Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN11O75508 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLDN11O75508 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CLDN11O75508 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN11O75508 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN11O75508 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN11O75508 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CLDN11O75508 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN11O75508 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN11O75508 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN11O75508 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN11O75508 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN11O75508 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN11O75508 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 ZNF890P-202ENST00000530367 1156 ntBASIC16.47■□□□□ 0.23
CLDN11O75508 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN11O75508 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.47■□□□□ 0.23
CLDN11O75508 AL844908.2-201ENST00000609461 460 ntBASIC16.47■□□□□ 0.23
CLDN11O75508 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CLDN11O75508 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN11O75508 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN11O75508 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN11O75508 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLDN11O75508 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN11O75508 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 AC022144.1-201ENST00000602255 1580 ntBASIC16.47■□□□□ 0.23
CLDN11O75508 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN11O75508 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN11O75508 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CLDN11O75508 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN11O75508 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CLDN11O75508 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CLDN11O75508 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLDN11O75508 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLDN11O75508 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN11O75508 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN11O75508 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN11O75508 AC009477.1-201ENST00000452936 217 ntBASIC16.46■□□□□ 0.23
CLDN11O75508 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN11O75508 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CLDN11O75508 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN11O75508 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN11O75508 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN11O75508 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 PCDHB19P-201ENST00000570871 2371 ntBASIC16.46■□□□□ 0.23
CLDN11O75508 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CLDN11O75508 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN11O75508 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN11O75508 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN11O75508 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN11O75508 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN11O75508 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN11O75508 AC134407.2-201ENST00000625089 1978 ntBASIC16.46■□□□□ 0.22
CLDN11O75508 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN11O75508 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN11O75508 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 PCDH8P1-201ENST00000428983 2773 ntBASIC16.45■□□□□ 0.22
CLDN11O75508 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN11O75508 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms