Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 SPTSSB-204ENST00000617024 1292 ntBASIC16.17■□□□□ 0.18
NDUFS3O75489 AC008267.7-201ENST00000624570 1194 ntBASIC16.17■□□□□ 0.18
NDUFS3O75489 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS3O75489 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS3O75489 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS3O75489 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS3O75489 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NDUFS3O75489 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NDUFS3O75489 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS3O75489 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS3O75489 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS3O75489 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
NDUFS3O75489 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NDUFS3O75489 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFS3O75489 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NDUFS3O75489 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
NDUFS3O75489 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFS3O75489 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NDUFS3O75489 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFS3O75489 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 HTR5BP-201ENST00000430851 1154 ntBASIC16.16■□□□□ 0.18
NDUFS3O75489 MKNK2P1-201ENST00000437526 628 ntBASIC16.16■□□□□ 0.18
NDUFS3O75489 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.16■□□□□ 0.18
NDUFS3O75489 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.16■□□□□ 0.18
NDUFS3O75489 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.16■□□□□ 0.18
NDUFS3O75489 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NDUFS3O75489 MIR4321-201ENST00000592276 80 ntBASIC16.16■□□□□ 0.18
NDUFS3O75489 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.16■□□□□ 0.18
NDUFS3O75489 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NDUFS3O75489 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 AC069224.1-201ENST00000566372 1715 ntBASIC16.16■□□□□ 0.18
NDUFS3O75489 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFS3O75489 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS3O75489 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NDUFS3O75489 AC007950.2-201ENST00000615045 2347 ntBASIC16.16■□□□□ 0.18
NDUFS3O75489 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NDUFS3O75489 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NDUFS3O75489 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS3O75489 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NDUFS3O75489 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS3O75489 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.15■□□□□ 0.18
NDUFS3O75489 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NDUFS3O75489 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.15■□□□□ 0.18
NDUFS3O75489 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 AC245100.5-201ENST00000452108 331 ntBASIC16.15■□□□□ 0.18
NDUFS3O75489 TIMM8BP1-201ENST00000452384 211 ntBASIC16.15■□□□□ 0.18
NDUFS3O75489 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.15■□□□□ 0.18
NDUFS3O75489 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.15■□□□□ 0.18
NDUFS3O75489 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS3O75489 IGHV3-62-201ENST00000520057 340 ntBASIC16.15■□□□□ 0.18
NDUFS3O75489 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.15■□□□□ 0.18
NDUFS3O75489 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.15■□□□□ 0.18
NDUFS3O75489 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
NDUFS3O75489 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.15■□□□□ 0.18
NDUFS3O75489 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.15■□□□□ 0.18
NDUFS3O75489 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NDUFS3O75489 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS3O75489 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS3O75489 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
NDUFS3O75489 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms