Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.27□□□□□ -0.29
SSSCA1O60232 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SSSCA1O60232 CICP24-201ENST00000605464 2705 ntBASIC13.26□□□□□ -0.29
SSSCA1O60232 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SSSCA1O60232 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.26□□□□□ -0.29
SSSCA1O60232 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SSSCA1O60232 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SSSCA1O60232 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.26□□□□□ -0.29
SSSCA1O60232 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.26□□□□□ -0.29
SSSCA1O60232 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.26□□□□□ -0.29
SSSCA1O60232 PMS2P1-201ENST00000431037 1228 ntBASIC13.26□□□□□ -0.29
SSSCA1O60232 KRT18P1-202ENST00000452408 1331 ntBASIC13.26□□□□□ -0.29
SSSCA1O60232 AC063952.2-201ENST00000498792 1227 ntBASIC13.26□□□□□ -0.29
SSSCA1O60232 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.26□□□□□ -0.29
SSSCA1O60232 SLC22A20-204ENST00000530038 1673 ntBASIC13.26□□□□□ -0.29
SSSCA1O60232 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.26□□□□□ -0.29
SSSCA1O60232 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.26□□□□□ -0.29
SSSCA1O60232 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.26□□□□□ -0.29
SSSCA1O60232 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SSSCA1O60232 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SSSCA1O60232 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
SSSCA1O60232 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.26□□□□□ -0.29
SSSCA1O60232 AC005622.1-201ENST00000636801 1703 ntBASIC13.26□□□□□ -0.29
SSSCA1O60232 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.26□□□□□ -0.29
SSSCA1O60232 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSSCA1O60232 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.25□□□□□ -0.29
SSSCA1O60232 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.25□□□□□ -0.29
SSSCA1O60232 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
SSSCA1O60232 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.25□□□□□ -0.29
SSSCA1O60232 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 ABCD1P5-201ENST00000445663 754 ntBASIC13.25□□□□□ -0.29
SSSCA1O60232 PAWRP1-201ENST00000451083 565 ntBASIC13.25□□□□□ -0.29
SSSCA1O60232 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 KRT17P6-201ENST00000453795 1220 ntBASIC13.25□□□□□ -0.29
SSSCA1O60232 AC087163.2-201ENST00000457299 853 ntBASIC13.25□□□□□ -0.29
SSSCA1O60232 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 BX005266.1-201ENST00000473402 457 ntBASIC13.25□□□□□ -0.29
SSSCA1O60232 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.25□□□□□ -0.29
SSSCA1O60232 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.25□□□□□ -0.29
SSSCA1O60232 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SSSCA1O60232 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 AC064862.7-201ENST00000604520 867 ntBASIC13.25□□□□□ -0.29
SSSCA1O60232 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 AP001350.2-201ENST00000625104 1094 ntBASIC13.25□□□□□ -0.29
SSSCA1O60232 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms