Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXS1O43638 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXS1O43638 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXS1O43638 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXS1O43638 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXS1O43638 MIR6069-201ENST00000620069 79 ntBASIC15.16■□□□□ 0.02
FOXS1O43638 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.16■□□□□ 0.02
FOXS1O43638 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXS1O43638 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXS1O43638 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXS1O43638 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXS1O43638 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXS1O43638 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXS1O43638 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXS1O43638 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXS1O43638 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXS1O43638 AC026691.1-201ENST00000602502 2017 ntBASIC15.16■□□□□ 0.02
FOXS1O43638 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
FOXS1O43638 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 AL391005.1-201ENST00000623953 2435 ntBASIC15.15■□□□□ 0.02
FOXS1O43638 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXS1O43638 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXS1O43638 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 AZGP1P1-201ENST00000411909 902 ntBASIC15.15■□□□□ 0.02
FOXS1O43638 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXS1O43638 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXS1O43638 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXS1O43638 AC044860.1-202ENST00000559481 777 ntBASIC15.15■□□□□ 0.02
FOXS1O43638 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
FOXS1O43638 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.15■□□□□ 0.02
FOXS1O43638 RN7SL204P-201ENST00000582831 262 ntBASIC15.15■□□□□ 0.02
FOXS1O43638 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.15■□□□□ 0.02
FOXS1O43638 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXS1O43638 AC004840.1-201ENST00000636359 365 ntBASIC15.15■□□□□ 0.02
FOXS1O43638 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXS1O43638 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXS1O43638 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 DOC2GP-204ENST00000639052 2548 ntBASIC15.15■□□□□ 0.02
FOXS1O43638 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXS1O43638 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXS1O43638 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
FOXS1O43638 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
FOXS1O43638 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
FOXS1O43638 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
FOXS1O43638 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXS1O43638 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXS1O43638 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
FOXS1O43638 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXS1O43638 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXS1O43638 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXS1O43638 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.14■□□□□ 0.01
FOXS1O43638 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXS1O43638 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.14■□□□□ 0.01
FOXS1O43638 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXS1O43638 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.14■□□□□ 0.01
FOXS1O43638 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
FOXS1O43638 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
FOXS1O43638 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXS1O43638 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
FOXS1O43638 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXS1O43638 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
FOXS1O43638 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXS1O43638 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXS1O43638 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXS1O43638 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXS1O43638 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXS1O43638 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms