Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC025580.3-201ENST00000617932 1424 ntBASIC14.8□□□□□ -0.04
RNF13O43567 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RNF13O43567 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RNF13O43567 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF13O43567 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF13O43567 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF13O43567 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 AC022532.1-201ENST00000624563 1728 ntBASIC14.8□□□□□ -0.04
RNF13O43567 AC005622.1-201ENST00000636801 1703 ntBASIC14.8□□□□□ -0.04
RNF13O43567 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RNF13O43567 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF13O43567 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RNF13O43567 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RNF13O43567 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
RNF13O43567 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RNF13O43567 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF13O43567 AC073347.1-201ENST00000421633 2643 ntBASIC14.79□□□□□ -0.04
RNF13O43567 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF13O43567 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
RNF13O43567 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF13O43567 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF13O43567 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF13O43567 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RNF13O43567 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF13O43567 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF13O43567 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
RNF13O43567 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF13O43567 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RNF13O43567 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF13O43567 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RNF13O43567 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF13O43567 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 FDX1P1-201ENST00000449115 551 ntBASIC14.78□□□□□ -0.04
RNF13O43567 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.78□□□□□ -0.04
RNF13O43567 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF13O43567 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF13O43567 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF13O43567 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.78□□□□□ -0.04
RNF13O43567 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF13O43567 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF13O43567 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF13O43567 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.78□□□□□ -0.04
RNF13O43567 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 AL009183.1-201ENST00000603760 355 ntBASIC14.78□□□□□ -0.04
RNF13O43567 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
RNF13O43567 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RNF13O43567 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms