Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.41□□□□□ -0.1
SGCEO43556 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SGCEO43556 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.41□□□□□ -0.1
SGCEO43556 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SGCEO43556 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SGCEO43556 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SGCEO43556 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 REXO1L8P-201ENST00000604378 1897 ntBASIC14.4□□□□□ -0.1
SGCEO43556 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 AC002056.1-201ENST00000395613 760 ntBASIC14.4□□□□□ -0.1
SGCEO43556 AL022342.1-201ENST00000400363 863 ntBASIC14.4□□□□□ -0.1
SGCEO43556 MIR940-201ENST00000401276 94 ntBASIC14.4□□□□□ -0.1
SGCEO43556 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.4□□□□□ -0.1
SGCEO43556 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 AC112191.1-201ENST00000523689 701 ntBASIC14.4□□□□□ -0.1
SGCEO43556 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.4□□□□□ -0.1
SGCEO43556 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 AL078644.1-201ENST00000609881 752 ntBASIC14.4□□□□□ -0.1
SGCEO43556 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 AC026691.1-201ENST00000602502 2017 ntBASIC14.4□□□□□ -0.1
SGCEO43556 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.4□□□□□ -0.1
SGCEO43556 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.4□□□□□ -0.1
SGCEO43556 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 AC092919.2-201ENST00000623631 1645 ntBASIC14.4□□□□□ -0.1
SGCEO43556 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.4□□□□□ -0.1
SGCEO43556 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SGCEO43556 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCEO43556 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.39□□□□□ -0.11
SGCEO43556 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.39□□□□□ -0.11
SGCEO43556 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 KRT18P58-201ENST00000527480 1120 ntBASIC14.39□□□□□ -0.11
SGCEO43556 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.39□□□□□ -0.11
SGCEO43556 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 AC092865.6-201ENST00000642101 219 ntBASIC14.39□□□□□ -0.11
SGCEO43556 AL596087.1-201ENST00000400979 1969 ntBASIC14.39□□□□□ -0.11
SGCEO43556 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 U82695.1-201ENST00000635752 1889 ntBASIC14.39□□□□□ -0.11
SGCEO43556 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 AC016027.1-202ENST00000607927 1699 ntBASIC14.39□□□□□ -0.11
SGCEO43556 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCEO43556 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCEO43556 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCEO43556 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms