Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
XRCC2O43543 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XRCC2O43543 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.13□□□□□ -0.15
XRCC2O43543 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
XRCC2O43543 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
XRCC2O43543 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XRCC2O43543 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.13□□□□□ -0.15
XRCC2O43543 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
XRCC2O43543 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.12□□□□□ -0.15
XRCC2O43543 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.12□□□□□ -0.15
XRCC2O43543 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.12□□□□□ -0.15
XRCC2O43543 AC024909.3-201ENST00000611513 2257 ntBASIC14.12□□□□□ -0.15
XRCC2O43543 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.12□□□□□ -0.15
XRCC2O43543 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
XRCC2O43543 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.12□□□□□ -0.15
XRCC2O43543 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
XRCC2O43543 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.12□□□□□ -0.15
XRCC2O43543 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
XRCC2O43543 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.12□□□□□ -0.15
XRCC2O43543 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.12□□□□□ -0.15
XRCC2O43543 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
XRCC2O43543 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.12□□□□□ -0.15
XRCC2O43543 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.12□□□□□ -0.15
XRCC2O43543 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.12□□□□□ -0.15
XRCC2O43543 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.12□□□□□ -0.15
XRCC2O43543 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.12□□□□□ -0.15
XRCC2O43543 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.12□□□□□ -0.15
XRCC2O43543 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.12□□□□□ -0.15
XRCC2O43543 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.12□□□□□ -0.15
XRCC2O43543 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.12□□□□□ -0.15
XRCC2O43543 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.12□□□□□ -0.15
XRCC2O43543 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 AKAP8P1-201ENST00000434743 1349 ntBASIC14.12□□□□□ -0.15
XRCC2O43543 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
XRCC2O43543 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XRCC2O43543 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
XRCC2O43543 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.11□□□□□ -0.15
XRCC2O43543 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.11□□□□□ -0.15
XRCC2O43543 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
XRCC2O43543 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.11□□□□□ -0.15
XRCC2O43543 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.11□□□□□ -0.15
XRCC2O43543 KRT18P58-201ENST00000527480 1120 ntBASIC14.11□□□□□ -0.15
XRCC2O43543 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
XRCC2O43543 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.11□□□□□ -0.15
XRCC2O43543 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.11□□□□□ -0.15
XRCC2O43543 AC002347.1-201ENST00000569543 541 ntBASIC14.11□□□□□ -0.15
XRCC2O43543 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.11□□□□□ -0.15
XRCC2O43543 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
XRCC2O43543 AC092865.6-201ENST00000642101 219 ntBASIC14.11□□□□□ -0.15
XRCC2O43543 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms