Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
MID1O15344 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MID1O15344 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 AC087499.6-201ENST00000411576 835 ntBASIC16.15■□□□□ 0.18
MID1O15344 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.15■□□□□ 0.18
MID1O15344 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.15■□□□□ 0.18
MID1O15344 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
MID1O15344 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
MID1O15344 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.15■□□□□ 0.18
MID1O15344 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.15■□□□□ 0.18
MID1O15344 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.15■□□□□ 0.18
MID1O15344 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
MID1O15344 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.15■□□□□ 0.18
MID1O15344 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MID1O15344 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.15■□□□□ 0.18
MID1O15344 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.15■□□□□ 0.18
MID1O15344 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MID1O15344 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.15■□□□□ 0.18
MID1O15344 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.14■□□□□ 0.18
MID1O15344 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
MID1O15344 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
MID1O15344 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.14■□□□□ 0.18
MID1O15344 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 AL391825.1-201ENST00000457671 1364 ntBASIC16.14■□□□□ 0.17
MID1O15344 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MID1O15344 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MID1O15344 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MID1O15344 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
MID1O15344 AL691432.1-201ENST00000596308 1422 ntBASIC16.14■□□□□ 0.17
MID1O15344 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MID1O15344 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
MID1O15344 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.14■□□□□ 0.17
MID1O15344 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
MID1O15344 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.14■□□□□ 0.17
MID1O15344 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.14■□□□□ 0.17
MID1O15344 DGCR5-201ENST00000399539 862 ntBASIC16.14■□□□□ 0.17
MID1O15344 FO393414.2-201ENST00000405153 598 ntBASIC16.14■□□□□ 0.17
MID1O15344 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.14■□□□□ 0.17
MID1O15344 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.14■□□□□ 0.17
MID1O15344 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.14■□□□□ 0.17
MID1O15344 AC244107.1-201ENST00000442033 332 ntBASIC16.14■□□□□ 0.17
MID1O15344 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.14■□□□□ 0.17
MID1O15344 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.14■□□□□ 0.17
MID1O15344 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.14■□□□□ 0.17
MID1O15344 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
MID1O15344 TPRX2P-201ENST00000535362 881 ntBASIC16.14■□□□□ 0.17
MID1O15344 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.14■□□□□ 0.17
MID1O15344 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.14■□□□□ 0.17
MID1O15344 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.14■□□□□ 0.17
MID1O15344 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 TNRC18P3-201ENST00000441896 2691 ntBASIC16.14■□□□□ 0.17
MID1O15344 AC138969.3-201ENST00000546612 1459 ntBASIC16.14■□□□□ 0.17
MID1O15344 AC138932.2-201ENST00000548268 1459 ntBASIC16.14■□□□□ 0.17
MID1O15344 AC126755.4-201ENST00000549796 1459 ntBASIC16.14■□□□□ 0.17
MID1O15344 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.14■□□□□ 0.17
MID1O15344 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.14■□□□□ 0.17
MID1O15344 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MID1O15344 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MID1O15344 SLC7A15P-201ENST00000424028 1363 ntBASIC16.13■□□□□ 0.17
MID1O15344 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MID1O15344 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms