Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
NDUFA1O15239 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 GPAA1P2-202ENST00000606848 1787 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
NDUFA1O15239 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.13□□□□□ -0.63
NDUFA1O15239 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 AP005117.1-201ENST00000584346 1413 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.13□□□□□ -0.63
NDUFA1O15239 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.13□□□□□ -0.63
NDUFA1O15239 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.13□□□□□ -0.63
NDUFA1O15239 PRYP5-201ENST00000451909 266 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.13□□□□□ -0.63
NDUFA1O15239 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.13□□□□□ -0.63
NDUFA1O15239 MIR3180-1-201ENST00000580374 94 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.13□□□□□ -0.63
NDUFA1O15239 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 MIR3180-3-201ENST00000584616 94 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 TERC-201ENST00000602385 541 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 AL353135.1-201ENST00000606729 504 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 AC092119.3-201ENST00000612618 583 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.13□□□□□ -0.63
NDUFA1O15239 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.13□□□□□ -0.63
NDUFA1O15239 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.13□□□□□ -0.63
NDUFA1O15239 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.13□□□□□ -0.63
NDUFA1O15239 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.13□□□□□ -0.63
NDUFA1O15239 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 TOP3BP1-201ENST00000420768 1380 ntBASIC11.13□□□□□ -0.63
NDUFA1O15239 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NDUFA1O15239 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
NDUFA1O15239 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
NDUFA1O15239 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 AL590787.1-201ENST00000568856 1315 ntBASIC11.12□□□□□ -0.63
NDUFA1O15239 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
NDUFA1O15239 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
NDUFA1O15239 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.12□□□□□ -0.63
NDUFA1O15239 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.12□□□□□ -0.63
NDUFA1O15239 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.12□□□□□ -0.63
NDUFA1O15239 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
NDUFA1O15239 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.12□□□□□ -0.63
NDUFA1O15239 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 RBM17P3-201ENST00000417687 1192 ntBASIC11.12□□□□□ -0.63
NDUFA1O15239 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 ATP5G2P1-201ENST00000433580 426 ntBASIC11.12□□□□□ -0.63
NDUFA1O15239 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms